Pre_GI: BLASTP Hits

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Query: NC_004088:3186954:3195496 Yersinia pestis KIM, complete genome

Start: 3195496, End: 3196248, Length: 753

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005810:1413305:142186314218631422615753Yersinia pestis biovar Microtus str. 91001, complete genomeputative ribose 5-phosphate isomerase9e-140496
NC_008149:3022970:303150430315043032214711Yersinia pestis Nepal516, complete genomeribose 5-phosphate isomerase8e-131466
NC_003143:1441211:145151714515171452227711Yersinia pestis CO92, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_008150:1147883:115762511576251158335711Yersinia pestis Antiqua, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_006155:1567306:157764915776491578359711Yersinia pseudotuberculosis IP 32953, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_009381:2731965:274049927404992741209711Yersinia pestis Pestoides F chromosome, complete genomeribose 5-phosphate isomerase8e-131466
NC_014029:1512605:152291115229111523621711Yersinia pestis Z176003 chromosome, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_017154:1454704:146501014650101465720711Yersinia pestis D106004 chromosome, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_017160:1299733:130809113080911308801711Yersinia pestis D182038 chromosome, complete genomeputative ribose 5-phosphate isomerase8e-131466
NC_017168:4363000:437357743735774374287711Yersinia pestis A1122 chromosome, complete genomeribose 5-phosphate isomerase A8e-131466
NC_017265:2807302:281584528158452816555711Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative ribose 5-phosphate isomerase8e-131466
NC_010159:1558000:156840015684001569110711Yersinia pestis Angola, complete genomeribose 5-phosphate isomerase A6e-130463
NC_010465:3046904:305551430555143056224711Yersinia pseudotuberculosis YPIII, complete genomeribose 5-phosphate isomerase1e-129462
NC_009708:3035798:304431230443123045022711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeribose 5-phosphate isomerase A7e-124442
NC_015690:6595395:659863665986366599325690Paenibacillus mucilaginosus KNP414 chromosome, complete genomeribose 5-phosphate isomerase6e-42171
NC_013926:511674:530958530958531650693Aciduliprofundum boonei T469 chromosome, complete genomeribose 5-phosphate isomerase9e-41167
NC_014923:4017575:401967240196724020403732Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeribose 5-phosphate isomerase2e-38159
NC_015320:1159613:116183111618311162505675Archaeoglobus veneficus SNP6 chromosome, complete genomeRibose-5-phosphate isomerase A1e-36153
NC_015433:1315363:131725913172591317933675Streptococcus suis ST3 chromosome, complete genomeribose 5-phosphate isomerase A6e-35147
NC_008819:1531187:155252815525281553238711Prochlorococcus marinus str. NATL1A, complete genomeRibose 5-phosphate isomerase3e-33142
NC_009840:1485383:150558615055861506281696Prochlorococcus marinus str. MIT 9215, complete genomeRibose 5-phosphate isomerase5e-33141
NC_007335:944175:965516965516966226711Prochlorococcus marinus str. NATL2A, complete genomeribose 5-phosphate isomerase1e-32140
NC_019907:819165:822757822757823437681Liberibacter crescens BT-1 chromosome, complete genomeribose 5-phosphate isomerase A2e-32139
NC_005072:1405884:142605214260521426747696Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeRibose 5-phosphate isomerase5e-32137
NC_005042:1480761:150230115023011503014714Prochlorococcus marinus subsp. marinus str. CCMP1375, completeRibose 5-phosphate isomerase1e-31136
NC_007577:1458657:147818114781811478894714Prochlorococcus marinus str. MIT 9312, complete genomeribose 5-phosphate isomerase5e-31134
NC_008817:1443983:146349514634951464190696Prochlorococcus marinus str. MIT 9515, complete genomeRibose 5-phosphate isomerase8e-31134
NC_009091:1392469:141201114120111412706696Prochlorococcus marinus str. MIT 9301, complete genomeRibose 5-phosphate isomerase2e-30132
NC_008816:1416711:143623514362351436930696Prochlorococcus marinus str. AS9601, complete genomeRibose 5-phosphate isomerase6e-30130
NC_015224:889536:901742901742902404663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,ribose-5-phosphate isomerase A2e-29129
NC_014774:671695:691968691968692696729Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeribose-5-phosphate isomerase A8e-29127
NC_013416:1429881:143270314327031433359657Aggregatibacter actinomycetemcomitans D11S-1, complete genomeribose 5-phosphate isomerase A2e-28126
NC_014323:3976351:397635139763513977022672Herbaspirillum seropedicae SmR1 chromosome, complete genomeribose 5-phosphate isomerase2e-28125
NC_009512:5632591:568485056848505685524675Pseudomonas putida F1, complete genomeribose 5-phosphate isomerase3e-28125
NC_009634:547995:552342552342553061720Methanococcus vannielii SB chromosome, complete genomeribose-5-phosphate isomerase A3e-28125
NC_000917:829159:842320842320842997678Archaeoglobus fulgidus DSM 4304, complete genomeribose 5-phosphate isomerase (rpi)4e-28124
NC_005085:1269787:132424713242471324906660Chromobacterium violaceum ATCC 12472, complete genomeribose-5-phosphate isomerase A1e-27123
NC_009637:438037:441169441169441888720Methanococcus maripaludis C7 chromosome, complete genomeribose-5-phosphate isomerase A2e-27122
NC_018697:2055725:205615720561572056813657Cycloclasticus sp. P1 chromosome, complete genomeRibose 5-phosphate isomerase A7e-27120
NC_017347:2437902:245663924566392457325687Staphylococcus aureus subsp. aureus T0131 chromosome, completeribose-5-phosphate isomerase A2e-26119
NC_009975:1374500:139027313902731390992720Methanococcus maripaludis C6, complete genomeribose 5-phosphate isomerase1e-26119
NC_011901:2914000:291412429141242914780657Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribose 5-phosphate isomerase4e-26118
NC_014122:606000:615570615570616235666Methanocaldococcus infernus ME chromosome, complete genomeribose 5-phosphate isomerase9e-26117
NC_009135:330628:366500366500367219720Methanococcus maripaludis C5, complete genomeribose 5-phosphate isomerase9e-26117
NC_020248:708024:715525715525716226702Chlamydophila psittaci Mat116, complete genomeribose-5-phosphate isomerase A4e-25115
NC_015470:715500:723050723050723751702Chlamydophila psittaci 6BC chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_017287:710104:722962722962723663702Chlamydophila psittaci 6BC chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_017289:716085:723586723586724287702Chlamydophila psittaci 01DC11 chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_017290:716092:723593723593724294702Chlamydophila psittaci 08DC60 chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_017291:713265:720766720766721467702Chlamydophila psittaci C19/98 chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_017292:716050:723551723551724252702Chlamydophila psittaci 02DC15 chromosome, complete genomeribose 5-phosphate isomerase A4e-25115
NC_013407:146000:168949168949169629681Methanocaldococcus vulcanius M7, complete genomeribose 5-phosphate isomerase7e-25114
NC_015602:1143038:114912311491231149815693Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeribose-5-phosphate isomerase A1e-23110
NC_016776:4115889:413236041323604133061702Bacteroides fragilis 638R, complete genomeputative ribose 5-phosphate isomerase2e-1892.4
NC_003551:1650476:166719016671901667828639Methanopyrus kandleri AV19, complete genomeRibose 5-phosphate isomerase2e-1686.3
NC_006156:685344:698675698675699361687Borrelia garinii PBi chromosome linear, complete sequenceribose 5-phosphate isomerase2e-1582.8
NC_007181:1094422:110892411089241109586663Sulfolobus acidocaldarius DSM 639, complete genomeribose 5-phosphate isomerase1e-0860.5
NC_002754:824180:837100837100837783684Sulfolobus solfataricus P2, complete genomeRibose 5-phosphate isomerase (rpiA)1e-0860.1
NC_017275:1189162:120057312005731201256684Sulfolobus islandicus HVE10/4 chromosome, complete genomeribose 5-phosphate isomerase4e-0755.5
NC_012632:1249334:126382612638261264509684Sulfolobus islandicus M.16.27 chromosome, complete genomeribose 5-phosphate isomerase4e-0755.5
NC_012589:1241782:125320612532061253889684Sulfolobus islandicus L.S.2.15, complete genomeribose 5-phosphate isomerase4e-0755.5
NC_017276:1051707:106496910649691065652684Sulfolobus islandicus REY15A chromosome, complete genomeribose 5-phosphate isomerase4e-0755.5
NC_012623:1405893:141158914115891412272684Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeribose 5-phosphate isomerase4e-0755.1