Pre_GI: BLASTP Hits

Some Help

Query: NC_004088:2937077:2960107 Yersinia pestis KIM, complete genome

Start: 2960107, End: 2961192, Length: 1086

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2557476:2580505258050525815901086Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0737
NC_017168:3948514:3971543397154339726281086Yersinia pestis A1122 chromosome, complete genomehypothetical protein0737
NC_014029:1760948:1760948176094817620331086Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0737
NC_010465:2820500:2840999284099928420841086Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0111 family0734
NC_009708:2788855:2810553281055328116381086Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein0734
NC_009381:1655731:1677437167743716785221086Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0732
NC_012731:2302974:2326872232687223279571086Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-124445
NC_014121:1822895:1842623184262318437081086Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpH1e-123443
NC_014837:3766426:3787464378746437885341071Pantoea sp. At-9b chromosome, complete genometype VI secretion protein1e-117423
NC_005126:3812054:3811002381100238120901089Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-117421
NC_012962:3568046:3575095357509535761471053Photorhabdus asymbiotica, complete genomehypothetical protein2e-113409
NC_011283:942594:9435379435379446191083Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein2e-110399
NC_009648:3476000:3494988349498834960701083Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-109394
NC_008253:2965573:2969200296920029702791080Escherichia coli 536, complete genomehypothetical protein2e-107389
NC_011742:3057444:3060870306087030619581089Escherichia coli S88 chromosome, complete genomehypothetical protein5e-107387
NC_015062:130359:1485221485221496041083Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion protein, VC_A0111 family3e-106385
NC_017060:125480:1453521453521464341083Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion protein3e-106385
NC_012962:4427000:4432530443253044335611032Photorhabdus asymbiotica, complete genomehypothetical protein9e-99360
NC_010501:3575726:3575726357572635768231098Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0111 family1e-98360
NC_013282:2026083:2055691205569120567731083Cronobacter turicensis, complete genomehypothetical protein1e-97356
NC_013971:465318:4670514670514681331083Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein7e-96350
NC_009778:1956225:1973284197328419743661083Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-89328
NC_014306:4376012:4395682439568243967071026Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein8e-85314
NC_011283:2103500:2121133212113321222241092Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein2e-83310
NC_010552:592154:6143696143696154931125Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0111 family7e-57221
NC_009255:1250939:1277183127718312781991017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein9e-52204
NC_009255:2044291:2044291204429120453071017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein9e-52204
NC_016626:400080:4282424282424293061065Burkholderia sp. YI23 plasmid byi_1p, complete sequencetype VI secretion protein8e-52204
NC_014539:3619511:3618414361841436195141101Burkholderia sp. CCGE1003 chromosome 1, complete sequencetype VI secretion protein1e-49197
NC_012721:1395417:1394299139429913954201122Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-49197
NC_007348:2011957:2032659203265920337081050Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF13054e-48192
NC_014228:4331327:4351521435152143525731053Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of the SST VI cluster)4e-32139
NC_013892:274297:2742972742972753491053Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-32139
NC_020260:1993344:200759120075912008268678Cronobacter sakazakii Sp291, complete genometype VI secretion protein2e-30133
NC_011274:1129686:1128634112863411297281095Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-27121
NC_008253:257059:2570592570592581081050Escherichia coli 536, complete genomehypothetical protein2e-26119
NC_016822:267758:2667122667122677941083Shigella sonnei 53G, complete genomehypothetical protein3e-26119
NC_011751:256830:2558172558172568661050Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-26118
NC_008563:258725:2577122577122587611050Escherichia coli APEC O1, complete genomehypothetical protein8e-26118
NC_007946:258747:2577342577342587831050Escherichia coli UTI89, complete genomehypothetical protein8e-26118
NC_011742:258746:2577332577332587821050Escherichia coli S88 chromosome, complete genomehypothetical protein8e-26118
NC_005126:349658:395492395492396472981Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-26118
NC_011745:258727:2577142577142587631050Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-25117
NC_008570:1986466:200289620028962003894999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein5e-25115
NC_009348:2631759:2630791263079126317951005Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein6e-25115
NC_013421:1143500:116200111620011162999999Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0111 family6e-24112
NC_013592:1424560:1442701144270114437141014Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0111 family3e-23109
NC_015968:4117835:414967541496754150631957Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein3e-22106
NC_002947:4604582:4606312460631246073281017Pseudomonas putida KT2440, complete genomehypothetical protein9e-22104
NC_004578:2797493:2811942281194228129491008Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-1995.1
NC_009656:3733913:3739524373952437405311008Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1894
NC_012913:1832500:184208218420821843080999Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family7e-1891.7
NC_012779:2619871:2637980263798026390051026Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-1790.1
NC_014355:1865003:1896587189658718976511065Candidatus Nitrospira defluvii, complete genomehypothetical protein5e-1789
NC_012997:1689583:1703569170356917046841116Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0111 family1e-1687.8
NC_014306:679888:6994466994467005101065Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein2e-1686.7
NC_002947:3492379:3491345349134534924151071Pseudomonas putida KT2440, complete genomehypothetical protein1e-1584.7
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein2e-1584
NC_007963:2555012:255402325540232555015993Chromohalobacter salexigens DSM 3043, complete genomeprotein of unknown function DUF13051e-1481.3
NC_007511:1780500:1799185179918518002881104Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF13059e-1478.2
NC_010322:3084834:3104873310487331059431071Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein1e-1377.8
NC_010625:670482:6729496729496740371089Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion protein, VC_A0111 family3e-1273.2
NC_017192:2216914:224035322403532241345993Arcobacter sp. L, complete genomehypothetical protein4e-1272.4
NC_009832:3313058:3313058331305833141311074Serratia proteamaculans 568, complete genomeprotein of unknown function DUF13053e-1170.1
NC_015663:4129685:4146811414681141478541044Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpH2e-1170.1
NC_020064:2921809:2942381294238129434511071Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0111 family2e-1067.4
NC_008314:2744553:2743552274355227445981047Ralstonia eutropha H16 chromosome 2, complete sequencequinoprotein dehydrogenase2e-1067
NC_015136:813701:8148068148068177632958Burkholderia sp. CCGE1001 chromosome 1, complete sequencetype VI secretion protein2e-1067
NC_018868:973379:9849389849389860801143Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein2e-1067
NC_016816:1823127:1842920184292018439691050Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein1e-0964.3
NC_016514:2713834:2771045277104527720881044Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein5e-0962.4
NC_017075:2689014:2707126270712627081961071Rubrivivax gelatinosus IL144, complete genomehypothetical protein3e-0756.6
NC_007952:495000:5085315085315095891059Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein1e-0654.3
NC_006349:400807:4008074008074021771371Burkholderia mallei ATCC 23344 chromosome 2, complete sequencehypothetical protein1e-0654.3
NC_008835:1827905:1830848183084818323261479Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein2e-0653.9
NC_009079:402891:4028914028914043691479Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein2e-0653.9
NC_017265:4065625:407244640724464072733288Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-0653.1
NC_017168:687471:694292694292694579288Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-0653.1
NC_009381:3680638:368748136874813687768288Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-0653.1
NC_003143:398748:411235411235411522288Yersinia pestis CO92, complete genomehypothetical protein3e-0653.1
NC_008150:4373722:438054343805434380830288Yersinia pestis Antiqua, complete genomehypothetical protein3e-0653.1
NC_004088:4202247:420906842090684209355288Yersinia pestis KIM, complete genomehypothetical protein3e-0653.1
NC_008149:318860:330443330443330730288Yersinia pestis Nepal516, complete genomehypothetical protein3e-0653.1
NC_005810:4306716:431336043133604313647288Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-0653.1