Pre_GI: BLASTP Hits

Some Help

Query: NC_004088:2937077:2959551 Yersinia pestis KIM, complete genome

Start: 2959551, End: 2960132, Length: 582

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2557476:257994925799492580530582Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative lipoprotein4e-110396
NC_017168:3948514:397098739709873971568582Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-110396
NC_014029:1760948:176200817620081762589582Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-110396
NC_009381:1655731:167688116768811677462582Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-110396
NC_009708:2788855:280999728099972810578582Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-109394
NC_010465:2820500:284044328404432841024582Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-109392
NC_014121:1822895:184368618436861844231546Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasD6e-60229
NC_014837:3766426:378695037869503787486537Pantoea sp. At-9b chromosome, complete genometype VI secretion lipoprotein6e-52203
NC_012731:2302974:232793523279352328477543Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-49192
NC_017060:125480:146498146498147040543Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion lipoprotein3e-46184
NC_015062:130359:149668149668150210543Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion lipoprotein, VC_A0113 family3e-46184
NC_010501:3575726:357520935752093575745537Pseudomonas putida W619, complete genomehypothetical protein2e-45181
NC_009778:1956225:197273719727371973258522Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-44179
NC_013282:2026083:205679920567992057320522Cronobacter turicensis, complete genomehypothetical protein8e-44176
NC_013971:465318:468159468159468683525Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein9e-44176
NC_012962:4427000:443201344320134432486474Photorhabdus asymbiotica, complete genomehypothetical protein8e-42169
NC_011283:2103500:212220521222052122741537Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion lipoprotein5e-39160
NC_011283:942594:943023943023943556534Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion lipoprotein2e-38158
NC_011742:3057444:306193930619393062475537Escherichia coli S88 chromosome, complete genomehypothetical protein2e-37154
NC_007946:3125577:313007231300723130608537Escherichia coli UTI89, complete genomehypothetical protein2e-37154
NC_008253:2965573:297026029702602970796537Escherichia coli 536, complete genomehypothetical protein2e-37154
NC_013961:3269368:329657032965703296995426Erwinia amylovora, complete genomehypothetical protein2e-35148
NC_013971:465318:474387474387474785399Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein8e-34143
NC_010552:592154:615507615507616025519Burkholderia ambifaria MC40-6 chromosome 2, complete sequencehypothetical protein1e-28125
NC_010067:2488141:251905025190502519373324Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-26118
NC_007348:2011957:203372120337212034359639Ralstonia eutropha JMP134 chromosome 2, complete sequenceputative Uncharacterized protein conserved in bacteria5e-25114
NC_016626:400080:429309429309429836528Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein9e-25113
NC_012721:710887:729677729677730213537Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein3e-23107
NC_009255:1250939:127824612782461278896651Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein4e-23107
NC_008313:691692:707107707107707613507Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein6e-0753.9
NC_014355:1865003:188021718802171880660444Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0652.8
NC_004605:1092476:110125511012551101710456Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein3e-0651.6
NC_005773:106000:150125150125150880756Pseudomonas syringae pv. phaseolicola 1448A, complete genomelipoprotein, putative5e-0650.8