Pre_GI: BLASTP Hits

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Query: NC_004088:2491303:2510474 Yersinia pestis KIM, complete genome

Start: 2510474, End: 2511034, Length: 561

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2213500:223213822321382232698561Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-96349
NC_010465:2383219:240234324023432402903561Yersinia pseudotuberculosis YPIII, complete genomecytoplasmic chaperone TorD family protein8e-96349
NC_010159:2546590:256560625656062566166561Yersinia pestis Angola, complete genomecytoplasmic chaperone, TorD family8e-96349
NC_009381:1205900:122498712249871225547561Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-96349
NC_009708:2347350:236523923652392365799561Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeTorD family cytoplasmic chaperone8e-96349
NC_014029:2285323:230446223044622305022561Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-96349
NC_017160:2212806:223196122319612232521561Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-96349
NC_017168:3433804:345277034527703453330561Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-96349
NC_017047:1796000:181141618114161812000585Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein5e-67253
NC_016816:2782373:278825527882552788824570Pantoea ananatis LMG 5342, complete genomecytoplasmic chaperone TorD family protein4e-65247
NC_015663:3466471:350106435010643501618555Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative oxidoreductase component1e-63242
NC_010468:2809125:280971828097182810272555Escherichia coli ATCC 8739, complete genomecytoplasmic chaperone TorD family protein3e-62237
AC_000091:1083798:109988110998811100435555Escherichia coli W3110 DNA, complete genomehypothetical protein3e-62237
NC_000913:1087062:109886310988631099417555Escherichia coli K12, complete genomehypothetical protein3e-62237
NC_008258:1076922:109390110939011094455555Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase component4e-62236
NC_010102:1979742:198120019812001981751552Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-62236
NC_015968:1709680:171495817149581715512555Enterobacter asburiae LF7a chromosome, complete genomecytoplasmic chaperone TorD family protein9e-62236
NC_011147:1763681:176665617666561767210555Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-61235
NC_011083:1216500:123119812311981231752555Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,chaperone, TorD family1e-61235
NC_003198:1117687:113712511371251137679555Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-61235
NC_006511:1770000:177147317714731772027555Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-61235
NC_003197:1207597:122684912268491227403555Salmonella typhimurium LT2, complete genomeputative oxidoreductase component1e-61235
NC_006905:1186895:120693512069351207489555Salmonella enterica subsp. enterica serovar Choleraesuis strparal putative oxidoreductase component1e-61235
NC_004631:1842050:184350418435041844058555Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-61235
NC_011080:1209935:122863612286361229190555Salmonella enterica subsp. enterica serovar Newport str. SL254,chaperone, TorD family1e-61235
NC_011205:2137696:213959421395942140148555Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chaperone, TorD family1e-61235
NC_011294:2009388:201128620112862011840555Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-61235
NC_017046:1164176:118306211830621183616555Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-61235
NC_016863:1165232:118430211843021184856555Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative oxidoreductase1e-61235
NC_016860:1205282:122453512245351225089555Salmonella enterica subsp. enterica serovar Typhimurium strchaperone, TorD family protein1e-61235
NC_016857:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative oxidoreductase1e-61235
NC_016856:1165941:118501111850111185565555Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative oxidoreductase1e-61235
NC_016832:1838220:184053918405391841093555Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-61235
NC_016810:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-61235
NC_012125:2646792:264824626482462648800555Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-61235
NC_011094:1166271:118515611851561185710555Salmonella enterica subsp. enterica serovar Schwarzengrund strchaperone, TorD family protein2e-61234
NC_010067:1782998:178443417844341784988555Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-61233
NC_004337:1065609:107452110745211075075555Shigella flexneri 2a str. 301, complete genomeputative oxidoreductase component6e-61233
NC_013716:1178383:119704111970411197595555Citrobacter rodentium ICC168, complete genomeputative chaperone4e-61233
NC_016514:1701273:170476517047651705319555Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcdY4e-59227
NC_014121:2629075:264489726448972645451555Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecytoplasmic chaperone TorD family protein5e-58223
NC_009778:2227627:223627422362742236840567Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-53208
NC_011274:2044000:204403220440322044529498Salmonella enterica subsp. enterica serovar Gallinarum str. 287/911e-50199
NC_009053:393700:399573399573400142570Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein4e-27120
NC_010939:405477:427285427285427854570Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein4e-27120
NC_010278:398521:404403404403404972570Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,component of anaerobic dehydrogenase4e-27120
NC_016513:1924242:193381919338191934382564Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeTorD protein1e-25115
NC_013416:1588369:159788915978891598452564Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTorD protein1e-25115
NC_016818:1605918:160684516068451607453609Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative component of anaerobic dehydrogenase2e-0962.4
NC_015061:1598920:159984715998471600455609Rahnella sp. Y9602 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-0962.4
NC_017047:1551836:155276315527631553371609Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein2e-0962.4
NC_011294:4409137:441298744129874413640654Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0858.2
NC_016831:4367000:437110143711014371694594Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-0857.8
NC_011274:4385039:439089543908954391548654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-0857.8
NC_011149:4474012:447792344779234478516594Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-0857.4
NC_011080:4543000:454691045469104547503594Salmonella enterica subsp. enterica serovar Newport str. SL254,oxidoreductase component2e-0755.8
NC_003197:4551880:455573145557314556384654Salmonella typhimurium LT2, complete genomeputative anaerobic dehydrogenase component2e-0755.8
NC_016810:4573172:457702345770234577676654Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0755.8
NC_016856:4563435:456927345692734569926654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative anaerobic dehydrogenase component2e-0755.8
NC_016857:4573173:457702445770244577677654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative anaerobic dehydrogenase component2e-0755.8
NC_016863:4513106:451687945168794517532654Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative anaerobic dehydrogenase component2e-0755.8
NC_012125:4481808:448571944857194486312594Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-0755.8
NC_006905:4486433:449028444902844490937654Salmonella enterica subsp. enterica serovar Choleraesuis strputative component of anaerobic dehydrogenase1e-0755.8
NC_009831:1539159:155485015548501555464615Shewanella sediminis HAW-EB3, complete genomecytoplasmic chaperone TorD family protein2e-0755.5
NC_011147:4297513:430330043033004304004705Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-0755.5
NC_016832:4368948:437277943727794373372594Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxidoreductase component2e-0755.5
NC_003198:4397074:440081244008124401498687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0755.5
NC_004631:4381724:438546243854624386148687Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0755.5
NC_011083:4547825:455173645517364552329594Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-0755.5
NC_010102:4477836:448174744817474482340594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0755.5
NC_016860:4649274:465318546531854653778594Salmonella enterica subsp. enterica serovar Typhimurium strputative anaerobic dehydrogenase component2e-0755.5
NC_017046:4571833:457574445757444576337594Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-0755.5
NC_011094:4442478:444632944463294446982654Salmonella enterica subsp. enterica serovar Schwarzengrund stroxidoreductase3e-0754.7
NC_011205:4564645:457054345705434571136594Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-0652.8
NC_010939:1920781:192932819293281929933606Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein1e-0652.8