Pre_GI: BLASTP Hits

Some Help

Query: NC_004088:2366000:2390163 Yersinia pestis KIM, complete genome

Start: 2390163, End: 2390810, Length: 648

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:2260118:229055822905582291187630Rahnella aquatilis HX2 chromosome, complete genomenicotinamidase/pyrazinamidase3e-75281
NC_016822:1431200:148600514860051486646642Shigella sonnei 53G, complete genomenicotinamidase/pyrazinamidase1e-72272
NC_014121:2514544:251557025155702516211642Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepyrazinamidase/nicotinamidase2e-71268
NC_015966:2337833:234975223497522350384633Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeNicotinamidase1e-41169
NC_013501:931418:938168938168938800633Rhodothermus marinus DSM 4252, complete genomeNicotinamidase1e-41169
NC_014011:1264165:127181812718181272399582Aminobacterium colombiense DSM 12261 chromosome, complete genomeNicotinamidase1e-38159
NC_010551:2007926:202804620280462028678633Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceNicotinamidase2e-36151
NC_008390:2058500:207873620787362079368633Burkholderia cepacia AMMD chromosome 1, complete sequenceNicotinamidase5e-36150
NC_013960:1587761:161487716148771615536660Nitrosococcus halophilus Nc4 chromosome, complete genomeNicotinamidase2e-32139
NC_007484:293763:299700299700300365666Nitrosococcus oceani ATCC 19707, complete genomeNicotinamidase4e-32137
NC_019907:773944:788699788699789325627Liberibacter crescens BT-1 chromosome, complete genomenicotinamidase2e-30132
NC_015947:223184:239980239980240606627Burkholderia sp. JV3 chromosome, complete genomeNicotinamidase1e-29129
NC_015680:369777:378690378690379235546Pyrococcus yayanosii CH1 chromosome, complete genomepyrazinamidase/nicotinamidase2e-29129
NC_000961:888000:907656907656908198543Pyrococcus horikoshii OT3, complete genomepyrazinamidase/nicotinamidase8e-29127
NC_007633:988000:994986994986995486501Mycoplasma capricolum subsp. capricolum ATCC 27343, completepyrazinamidase/nicotinamidase2e-21102
NC_015416:1478775:149959714995971500223627Methanosaeta concilii GP-6 chromosome, complete genomeisochorismatase family protein2e-21102
NC_010572:8493946:851161385116138512206594Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative nicotinamidase2e-1685.9
NC_010572:33724:337243372434317594Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative nicotinamidase2e-1685.9
NC_013170:917177:925423925423926001579Cryptobacterium curtum DSM 15641, complete genomenicotinamidase-like amidase6e-1684.3
NC_015320:743983:743983743983744516534Archaeoglobus veneficus SNP6 chromosome, complete genomeisochorismatase hydrolase6e-1580.9
NC_017297:1280963:128096312809631281523561Clostridium botulinum F str. 230613 chromosome, complete genomeisochorismatase family protein8e-1580.5
NC_017243:1323870:132656613265661327207642Brachyspira intermedia PWS/A chromosome, complete genomebifunctional pyrazinamidase/nicotinamidase2e-1479.3
NC_012225:236490:236490236490237131642Brachyspira hyodysenteriae WA1, complete genomebifunctional pyrazinamidase/nicotinamidase3e-1478.6
NC_012563:1348500:135031813503181350878561Clostridium botulinum A2 str. Kyoto, complete genomepncA family protein3e-1478.6
NC_014328:2518081:253877925387792539345567Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenicotinamidase1e-1376.3
NC_014330:337546:356596356596357237642Brachyspira pilosicoli 95/1000 chromosome, complete genomebifunctional pyrazinamidase nicotinamidase2e-1375.9
NC_013939:1417750:142337214233721423887516Deferribacter desulfuricans SSM1, complete genomeisochorismatase hydrolase2e-1375.9
NC_014246:496976:514764514764515360597Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative nicotinamidase5e-1271.2
NC_005877:665092:690138690138690668531Picrophilus torridus DSM 9790, complete genomeisochorismatase6e-1064.3
NC_016779:2693790:271063027106302711160531Bacillus cereus F837/76 chromosome, complete genomeisochorismatase2e-0962.4
NC_008600:2792584:280927028092702809800531Bacillus thuringiensis str. Al Hakam, complete genomeisochorismatase2e-0962.4
NC_006274:2779380:279748627974862798016531Bacillus cereus E33L, complete genomeisochorismatase6e-0960.8
NC_008767:2160000:217562521756252176260636Neisseria meningitidis FAM18, complete genomeputative nicotinamidase7e-0960.5
NC_014335:2718000:273618127361812736711531Bacillus cereus biovar anthracis str. CI chromosome, completeisochorismatase1e-0860.1
NC_011772:2860000:287884428788442879374531Bacillus cereus G9842, complete genomeisochorismatase family protein1e-0859.7
NC_017516:2220000:223503722350372235672636Neisseria meningitidis H44/76 chromosome, complete genomeisochorismatase family protein1e-0859.7
NC_017208:2942554:296110529611052961635531Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeisochorismatase3e-0858.5
NC_003997:2715623:273343427334342733964531Bacillus anthracis str. Ames, complete genomeisochorismatase family protein3e-0858.5
NC_005945:2716000:273389727338972734427531Bacillus anthracis str. Sterne, complete genomeisochorismatase family protein3e-0858.5
NC_007530:2716885:273356227335622734092531Bacillus anthracis str. 'Ames Ancestor', complete genomeisochorismatase family protein3e-0858.5
NC_011773:2782465:279924927992492799779531Bacillus cereus AH820 chromosome, complete genomeisochorismatase family protein3e-0858.5
NC_012659:2715651:273346227334622733992531Bacillus anthracis str. A0248, complete genomeisochorismatase family protein3e-0858.5
NC_017512:2209000:222152522215252222160636Neisseria meningitidis WUE 2594, complete genomeputative nicotinamidase (nicotine deamidase; NAMase)5e-0857.8
NC_002689:770326:787296787296787823528Thermoplasma volcanium GSS1, complete genomeAmidase (nicotinamidase-related)6e-0857.8
NC_011146:603429:616644616644617297654Geobacter bemidjiensis Bem, complete genomeisochorismatase hydrolase8e-0857.4
NC_010723:3499291:350750535075053508071567Clostridium botulinum E3 str. Alaska E43, complete genomeisochorismatase family protein1e-0757
NC_017511:1812000:182527118252711825906636Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeprotein PncA1e-0756.6
NC_011035:1908000:192142819214281922063636Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein PncA1e-0756.2
NC_002946:1902642:191054719105471911182636Neisseria gonorrhoeae FA 1090, complete genomePncA2e-0756.2
NC_012560:68251:801248012480687564Azotobacter vinelandii DJ, complete genomeIsochorismatase hydrolase2e-0756.2
NC_021150:68251:801248012480687564Azotobacter vinelandii CA6, complete genomeIsochorismatase hydrolase2e-0756.2
NC_013504:1388480:140523214052321405777546Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein3e-0651.6