Pre_GI: BLASTP Hits

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Query: NC_004088:2366000:2387165 Yersinia pestis KIM, complete genome

Start: 2387165, End: 2389015, Length: 1851

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005810:2180303:2180303218030321821531851Yersinia pestis biovar Microtus str. 91001, complete genomeprotease 401161
NC_010634:2376245:2376245237624523780951851Yersinia pseudotuberculosis PB1/+, complete genomesignal peptide peptidase SppA, 67K type01159
NC_013421:2453078:2454197245419724560471851Pectobacterium wasabiae WPP163, complete genomesignal peptide peptidase SppA, 67K type0875
NC_016822:1431200:1487840148784014896961857Shigella sonnei 53G, complete genomeprotease 40803
NC_016602:2586044:2586044258604425878941851Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceprotease IV9e-144510
NC_017265:2087487:210887721088772109653777Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,2e-138493
NC_008570:3777469:3779795377979537816391845Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesignal peptide peptidase SppA, 67K type3e-121436
NC_012913:626449:6485646485646504501887Aggregatibacter aphrophilus NJ8700, complete genomesignal peptide peptidase SppA, 67K type7e-114411
NC_006513:1379735:1379735137973513815761842Azoarcus sp. EbN1, complete genomeprotease IV2e-89330
NC_002488:2546495:2561252256125225631531902Xylella fastidiosa 9a5c, complete genomeprotease IV2e-88327
NC_006526:1976779:1979705197970519816181914Zymomonas mobilis subsp. mobilis ZM4, complete genomeperiplasmic serine protease4e-74279
NC_010475:1161000:1163563116356311653471785Synechococcus sp. PCC 7002, complete genomesignal peptide peptidase SppA, 67K type1e-68261
NC_014933:3755000:3768570376857037703451776Bacteroides helcogenes P 36-108 chromosome, complete genomesignal peptide peptidase A5e-67255
NC_014623:4535544:4546327454632745481051779Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase s49, protease iv9e-60231
NC_010338:1394550:1398729139872914005161788Caulobacter sp. K31, complete genomesignal peptide peptidase SppA, 67K type7e-50199
NC_020126:10319500:1034097710340977103427641788Myxococcus stipitatus DSM 14675, complete genomesignal peptide peptidase SppA, 67K type3e-43177
NC_015577:3688071:3688680368868036903141635Treponema azotonutricium ZAS-9 chromosome, complete genomepeptidase S49, protease IV2e-30134
NC_017278:1873934:187719018771901878128939Thermus sp. CCB_US3_UF1 chromosome, complete genomesignal peptide peptidase SppA1e-27125
NC_014378:4428:165021650217482981Acetohalobium arabaticum DSM 5501 chromosome, complete genomesignal peptide peptidase SppA, 36K type5e-27123
NC_019978:7535:214332143322431999Halobacteroides halobius DSM 5150, complete genomesignal peptide peptidase SppA, 36K type1e-24115
NC_009464:180335:205843205843206742900Uncultured methanogenic archaeon RC-I, complete genomeputative protease IV4e-20100
NC_010793:81219:897388973890646909Orientia tsutsugamushi str. Ikeda, complete genomeprotease IV7e-2099.4
NC_013410:1203937:1203937120393712062312295Fibrobacter succinogenes subsp. succinogenes S85 chromosome,signal peptide peptidase SppA, 36K type3e-1997.4
NC_013939:2117663:212898621289862129843858Deferribacter desulfuricans SSM1, complete genomesignal peptide peptidase SppA1e-1895.5
NC_007604:1967770:199146919914691992281813Synechococcus elongatus PCC 7942, complete genomesignal peptide peptidase SppA, 36K type3e-1893.6
NC_015672:1921023:195834619583461959218873Flexistipes sinusarabici DSM 4947 chromosome, complete genomesignal peptide peptidase SppA, 36K type2e-1791.3
NC_015636:1603664:160732116073211608253933Methanothermococcus okinawensis IH1 chromosome, complete genomesignal peptide peptidase SppA, 36K type2e-1791.3
NC_020207:2240115:2244281224428122453151035Enterococcus faecium NRRL B-2354, complete genomeProtease IV6e-1789.7
NC_007109:808331:823905823905824819915Rickettsia felis URRWXCal2, complete genomeSignal peptide peptidase SppA7e-1789.4
NC_009483:2640403:264793626479362648832897Geobacter uraniireducens Rf4 chromosome, complete genomesignal peptide peptidase SppA, 36K type1e-1688.6
NC_007799:392355:392355392355393221867Ehrlichia chaffeensis str. Arkansas, complete genomesignal peptide peptidase SppA2e-1687.8
NC_007354:845500:868575868575869441867Ehrlichia canis str. Jake, complete genomePeptidase S49, SppA9e-1685.9
NC_016631:5378810:5392974539297453940291056Granulicella mallensis MP5ACTX8 chromosome, complete genomesignal peptide peptidase SppA, 36K type2e-1584.3
NC_014804:401313:4013134013134023291017Thermococcus barophilus MP chromosome, complete genomeprotease IV6e-1583.2
NC_014844:762794:762794762794763783990Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesignal peptide peptidase SppA, 36K type2e-1481.6
NC_011666:1661491:1665071166507116664081338Methylocella silvestris BL2, complete genomepeptidase S495e-1480.1
NC_015216:1941000:196040119604011961339939Methanobacterium sp. AL-21 chromosome, complete genomesignal peptide peptidase SppA, 36K type5e-1479.7
NC_008340:362000:376939376939377937999Alkalilimnicola ehrlichei MLHE-1, complete genomepeptidase S491e-1379
NC_019907:1411124:141473214147321415667936Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein9e-1479
NC_015276:2171355:2185624218562421867271104Marinomonas mediterranea MMB-1 chromosome, complete genomepeptidase S495e-1273.2
NC_015380:859424:874266874266875069804Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomemacromolecule degradation protein3e-1170.9
NC_012988:32996:561025610257067966Methylobacterium extorquens DM4, complete genomepeptidase4e-1170.5
NC_019908:982471:9842079842079853071101Brachyspira pilosicoli P43/6/78 chromosome, complete genomeperiplasmic serine proteases ClpP class4e-1170.5
NC_018604:1045774:106392310639231064756834Brachyspira pilosicoli WesB complete genomeperiplasmic serine proteases ClpP class4e-1170.1
NC_018607:1803500:180350718035071804340834Brachyspira pilosicoli B2904 chromosome, complete genomeperiplasmic serine proteases ClpP class4e-1170.1
NC_014330:2268773:228690422869042287737834Brachyspira pilosicoli 95/1000 chromosome, complete genomeperiplasmic serine proteases ClpP class5e-1170.1
NC_011757:97281:115894115894116859966Methylobacterium chloromethanicum CM4, complete genomesignal peptide peptidase SppA, 36K type5e-1170.1
NC_013016:44188:488924889249878987Neisseria meningitidis alpha14 chromosome, complete genomeputative ClpP class peptidase7e-1169.7
NC_017518:2190607:221198622119862212972987Neisseria meningitidis NZ-05/33 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type2e-1068.2
NC_017517:2228000:225085122508512251837987Neisseria meningitidis M01-240355 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type2e-1068.2
NC_017514:2165166:218654521865452187531987Neisseria meningitidis M01-240149 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type2e-1068.2
NC_017515:2194500:221341422134142214400987Neisseria meningitidis M04-240196 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type2e-1067.8
NC_017505:2192284:220558922055892206575987Neisseria meningitidis alpha710 chromosome, complete genomeputative protease2e-1067.8
NC_003112:2215184:223442022344202235406987Neisseria meningitidis MC58, complete genomeputative protease3e-1067.4
NC_017501:2219803:224074022407402241726987Neisseria meningitidis 8013, complete genomeputative peptidase3e-1067.4
NC_017516:2183708:220294422029442203930987Neisseria meningitidis H44/76 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type3e-1067.4
NC_003116:291661:296167296167297153987Neisseria meningitidis Z2491, complete genomeprotease3e-1067.4
NC_017512:52228:567345673457720987Neisseria meningitidis WUE 2594, complete genomeputative peptidase3e-1067.4
NC_020211:2882093:2885421288542128864671047Serratia marcescens WW4, complete genomeputative inner membrane peptidase3e-1067.4
NC_002946:1935186:193991319399131940899987Neisseria gonorrhoeae FA 1090, complete genomeputative protease3e-1067
NC_011035:1876555:189174518917451892731987Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative protease3e-1067
NC_017511:1783000:179559917955991796585987Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative protease3e-1067
NC_012039:185607:202129202129203022894Campylobacter lari RM2100, complete genomeprotease IV9e-1065.9
NC_017513:2134308:214772421477242148710987Neisseria meningitidis G2136 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type3e-0964.3
NC_008767:2126854:214392621439262144912987Neisseria meningitidis FAM18, complete genomeputative protease3e-0964.3
NC_018691:3041851:304091430409143041891978Alcanivorax dieselolei B5 chromosome, complete genomePeptidase, S49 (Protease IV) family3e-0963.9
NC_010120:2098000:211408421140842114995912Neisseria meningitidis 053442, complete genomeprotease IV4e-0963.5
NC_017033:1052000:1078962107896210801911230Frateuria aurantia DSM 6220 chromosome, complete genomeClpP class periplasmic serine protease2e-0861.2
NC_017986:4885979:4887448488744848884671020Pseudomonas putida ND6 chromosome, complete genomePutative periplasmic protease2e-0861.2
NC_005244:37546:416924169242468777Pseudomonas sp. ND6 plasmid pND6-1, complete sequencepeptidase3e-0860.8
NC_004757:1089057:111191311119131112866954Nitrosomonas europaea ATCC 19718, complete genomePeptidase family U76e-0860.1
NC_015381:992401:1004335100433510053961062Burkholderia gladioli BSR3 chromosome 1, complete sequencepeptidase S492e-0758.2
NC_011985:2902000:2903725290372529049541230Agrobacterium radiobacter K84 chromosome 1, complete genomeprotease protein1e-0655.5
NC_015696:105748:110845110845111768924Francisella sp. TX077308 chromosome, complete genomeSignal peptide peptidase SppA, 36K type3e-0654.3
NC_005213:202400:284247284247285017771Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-0653.9
NC_013364:2522888:2553321255332125548261506Escherichia coli O111:H- str. 11128, complete genomeputative head protein/prohead protease9e-0652.4