Pre_GI: BLASTP Hits

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Query: NC_004088:2366000:2386451 Yersinia pestis KIM, complete genome

Start: 2386451, End: 2387002, Length: 552

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2087487:210816321081632108714552Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative oxidoreductase2e-97354
NC_010159:2440947:245858124585812459132552Yersinia pestis Angola, complete genomenitroreductase family protein2e-97354
NC_010634:2376245:237825823782582378809552Yersinia pseudotuberculosis PB1/+, complete genomenitroreductase2e-97354
NC_005810:2180303:218231621823162182867552Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-97354
NC_008150:1705152:170515217051521705703552Yersinia pestis Antiqua, complete genomeputative nitroreductase2e-97354
NC_003143:2433190:243319024331902433741552Yersinia pestis CO92, complete genomeputative nitroreductase2e-97354
NC_017154:2430093:243009324300932430644552Yersinia pestis D106004 chromosome, complete genomenitroreductase2e-97353
NC_013421:2453078:245631524563152456866552Pectobacterium wasabiae WPP163, complete genomenitroreductase2e-73274
NC_016822:1431200:148985714898571490408552Shigella sonnei 53G, complete genomeputative oxidoreductase5e-61233
NC_009092:1989977:199066319906631991211549Shewanella loihica PV-4, complete genomenitroreductase4e-39160
NC_012913:626449:647868647868648422555Aggregatibacter aphrophilus NJ8700, complete genomeNfnB protein6e-35146
NC_014366:1435785:145824214582421458802561Gamma proteobacterium HdN1, complete genomeNitroreductase family protein7e-32136
NC_017518:1701958:172221517222151722772558Neisseria meningitidis NZ-05/33 chromosome, complete genomenitroreductase family protein2e-30131
NC_003112:1685330:170128917012891701846558Neisseria meningitidis MC58, complete genomehypothetical protein3e-30131
NC_007912:1924392:192665619266561927219564Saccharophagus degradans 2-40, complete genomeconserved hypothetical protein XF20079e-2096.3
NC_010125:74904:788567885679497642Gluconacetobacter diazotrophicus PAl 5, complete genomeputative nitroreductase family protein1e-1995.9
NC_016027:1401500:141838814183881418975588Gluconacetobacter xylinus NBRC 3288, complete genomeoxidoreductase3e-1994.4
NC_009138:467268:480682480682481293612Herminiimonas arsenicoxydans, complete genomeconserved protein, nitroreductase domain4e-1374.3
NC_013446:4511602:451160245116024512519918Comamonas testosteroni CNB-2, complete genomenitroreductase2e-1271.6
NC_016599:513357:530590530590531180591Owenweeksia hongkongensis DSM 17368 chromosome, complete genomenitroreductase1e-0962.8
NC_010382:3350816:335664333566433357203561Lysinibacillus sphaericus C3-41, complete genomenitroreductase3e-0858.2