Pre_GI: BLASTP Hits

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Query: NC_004088:2366000:2385180 Yersinia pestis KIM, complete genome

Start: 2385180, End: 2386226, Length: 1047

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:2440947:2457310245731024583561047Yersinia pestis Angola, complete genomeselenide, water dikinase0709
NC_008149:1842500:1842580184258018436261047Yersinia pestis Nepal516, complete genomeselenide, water dikinase0709
NC_008150:1705152:1705928170592817069741047Yersinia pestis Antiqua, complete genomeselenide, water dikinase0709
NC_005810:2180303:2183092218309221841381047Yersinia pestis biovar Microtus str. 91001, complete genomeselenophosphate synthetase0709
NC_003143:2433190:2433966243396624350121047Yersinia pestis CO92, complete genomeselenophosphate synthetase0709
NC_017265:2087487:2106892210689221079381047Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,selenide, water dikinase0706
NC_006155:2461262:2461262246126224623081047Yersinia pseudotuberculosis IP 32953, complete genomeselenophosphate synthetase0706
NC_010634:2376245:2379034237903423800801047Yersinia pseudotuberculosis PB1/+, complete genomeselenide, water dikinase0706
NC_015224:2618192:2635923263592326369691047Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,selenophosphate synthetase0658
NC_008800:2448583:2466626246662624676721047Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,selenophosphate synthetase0657
NC_017154:2430093:243094424309442431915972Yersinia pestis D106004 chromosome, complete genomeselenide, water dikinase0656
NC_016822:1431200:1490525149052514915681044Shigella sonnei 53G, complete genomeselenophosphate synthetase4e-155547
NC_015410:2505168:2524905252490525259391035Pseudomonas mendocina NK-01 chromosome, complete genomeselenophosphate synthetase2e-127456
NC_015693:53196:7225272252732921041Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequenceSelenide, water dikinase3e-121435
NC_014118:2316000:2336092233609223371501059Burkholderia sp. CCGE1002 chromosome chromosome 2, completeselenide, water dikinase1e-89329
NC_013446:3147202:3171019317101931721131095Comamonas testosteroni CNB-2, complete genomeselenide, water dikinase2e-87322
NC_019902:831911:8534128534128544911080Thioalkalivibrio nitratireducens DSM 14787, complete genomeSelenide,water dikinase8e-85314
NC_010511:6711836:6730314673031467313631050Methylobacterium sp. 4-46 chromosome, complete genomeselenide, water dikinase4e-78291
NC_009380:636000:6558296558296568421014Salinispora tropica CNB-440 chromosome, complete genomeselenide, water dikinase6e-65248
NC_014377:1985714:1994072199407219951091038Thermosediminibacter oceani DSM 16646 chromosome, complete genomeselenophosphate synthase2e-64246
NC_013131:621366:6343966343966354241029Catenulispora acidiphila DSM 44928, complete genomeselenide, water dikinase7e-63241
NC_007760:3848190:387089338708933871837945Anaeromyxobacter dehalogenans 2CP-C, complete genomeselenide, water dikinase6e-62238
NC_007644:1638083:166128316612831662269987Moorella thermoacetica ATCC 39073, complete genomeselenide, water dikinase3e-60232
NC_020126:2883194:2884913288491328859711059Myxococcus stipitatus DSM 14675, complete genomeselenide, water dikinase1e-59230
NC_015434:1671532:168960216896021690591990Verrucosispora maris AB-18-032 chromosome, complete genomeselenide, water dikinase1e-57223
NC_003869:1812642:181761118176111818573963Thermoanaerobacter tengcongensis MB4, complete genomeSelenophosphate synthase2e-57223
NC_016584:4363382:4370559437055943715811023Desulfosporosinus orientis DSM 765 chromosome, complete genomeselenium donor protein2e-54213
NC_021182:401129:4196184196184206551038Clostridium pasteurianum BC1, complete genomeselenium donor protein1e-54213
NC_015519:426948:4633574633574643821026Tepidanaerobacter sp. Re1 chromosome, complete genomeSelenide, water dikinase8e-54211
NC_015873:790961:794347794347795300954Megasphaera elsdenii DSM 20460, complete genomeselenide5e-52205
NC_012108:2037429:203879820387982039718921Desulfobacterium autotrophicum HRM2, complete genomeSelD11e-49197
NC_016012:396910:406643406643407500858Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeselenide, water dikinase8e-48191
NC_013171:416279:4171464171464181591014Anaerococcus prevotii DSM 20548, complete genomeselenide, water dikinase2e-45183
NC_013223:2337049:233704923370492338005957Desulfohalobium retbaense DSM 5692, complete genomeselenide, water dikinase9e-45181
NC_000918:707801:713839713839714774936Aquifex aeolicus VF5, complete genomeselenophosphate synthase9e-44177
NC_013173:3132517:313621531362153137180966Desulfomicrobium baculatum DSM 4028, complete genomeselenide, water dikinase1e-43177
NC_013949:939695:958499958499959407909Helicobacter mustelae 12198 chromosome, complete genomeselenide,water dikinase6e-38158
NC_014507:2034000:2046049204604920470951047Methanoplanus petrolearius DSM 11571 chromosome, complete genomeselenide, water dikinase3e-35149
NC_009482:156171:1561711561711582132043Synechococcus sp. RCC307 chromosome, complete genomeselenophosphate synthase/FAD/NAD(P)-binding domain-containing protein9e-21101
NC_007516:193498:1934981934981955252028Synechococcus sp. CC9605, complete genomeSelenide,water dikinase2e-20100
NC_014972:2328228:2330770233077023318041035Desulfobulbus propionicus DSM 2032 chromosome, complete genomethiamine-monophosphate kinase2e-1170.5
NC_015519:245036:2566282566282576351008Tepidanaerobacter sp. Re1 chromosome, complete genomeThiamine-phosphate kinase4e-1169.3
NC_012883:695652:699517699517700506990Thermococcus sibiricus MM 739, complete genomeHydrogenase expression/formation protein HypE5e-1168.9
NC_012483:3529895:3538925353892535400491125Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase expression/formation protein HypE3e-1066.6
NC_013510:465188:4711494711494722071059Thermomonospora curvata DSM 43183, complete genomeAIR synthase related protein2e-0963.5
NC_009925:2240871:2239881223988122408821002Acaryochloris marina MBIC11017, complete genomethiamine-monophosphate kinase, putative9e-0961.6
NC_007681:1157402:117831111783111179294984Methanosphaera stadtmanae DSM 3091, complete genomepredicted selenophosphate synthetase-related protein6e-0858.9
NC_013665:415998:437336437336438322987Methanocella paludicola SANAE, complete genomeputative thiamine-monophosphate kinase7e-0858.5
NC_015574:1676798:168684616868461687844999Methanobacterium sp. SWAN-1 chromosome, complete genomemethanogenesis marker protein 26e-0858.5
NC_004193:375416:679855679855680823969Oceanobacillus iheyensis HTE831, complete genomethiamine monophosphate kinase1e-0654.7
NC_009635:518000:519804519804520778975Methanococcus aeolicus Nankai-3 chromosome, complete genomeAIR synthase related protein5e-0652.4
NC_008698:1612873:1613787161378716147941008Thermofilum pendens Hrk 5, complete genomeAIR synthase related protein domain protein6e-0652.4
NC_015381:3091500:3101745310174531028001056Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative thiamine-monophosphate kinase6e-0652
NC_015216:652266:657934657934658920987Methanobacterium sp. AL-21 chromosome, complete genomemethanogenesis marker protein 29e-0651.6