Pre_GI: BLASTP Hits

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Query: NC_004088:2366000:2379356 Yersinia pestis KIM, complete genome

Start: 2379356, End: 2379437, Length: 82

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2087487:21010532101053210113785Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,tRNA-Tyr3e-0857
NC_020260:1535394:15365041536504153658885Cronobacter sakazakii Sp291, complete genometRNA-Tyr3e-0857
NC_010634:2376245:23858362385836238592085Yersinia pseudotuberculosis PB1/+, complete genometRNA-Tyr3e-0857
NC_006155:2461262:24693842469384246946885Yersinia pseudotuberculosis IP 32953, complete genometRNA-Tyr3e-0857
NC_008149:1842500:18493811849381184946585Yersinia pestis Nepal516, complete genometRNA-Tyr3e-0857
NC_015224:2618192:26303562630356263044085Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-Tyr3e-0857
NC_008150:1705152:17127291712729171281385Yersinia pestis Antiqua, complete genometRNA-Tyr3e-0857
NC_015061:2867027:28850292885029288511385Rahnella sp. Y9602 chromosome, complete genometRNA-Tyr3e-0857
NC_015968:2583721:26017772601777260186185Enterobacter asburiae LF7a chromosome, complete genometRNA-Tyr3e-0857
NC_015968:2583721:26018972601897260198185Enterobacter asburiae LF7a chromosome, complete genometRNA-Tyr3e-0857
NC_006155:2461262:24695342469534246961885Yersinia pseudotuberculosis IP 32953, complete genometRNA-Tyr3e-0857
NC_005810:2180303:21899082189908218999285Yersinia pestis biovar Microtus str. 91001, complete genometRNA-Tyr3e-0857
NC_010634:2376245:23856862385686238577085Yersinia pseudotuberculosis PB1/+, complete genometRNA-Tyr3e-0857
NC_017255:31211:48688486884877285Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,tRNA-Tyr3e-0857
NC_017254:31206:48684486844876885Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,tRNA-Tyr3e-0857
NC_017252:31215:48690486904877485Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,tRNA-Tyr3e-0857
NC_017154:2430093:24376702437670243775485Yersinia pestis D106004 chromosome, complete genometRNA-Tyr3e-0857
NC_016514:2647984:26663622666362266644685Enterobacter cloacae EcWSU1 chromosome, complete genometRNA-Tyr3e-0857
NC_016514:2647984:26662422666242266632685Enterobacter cloacae EcWSU1 chromosome, complete genometRNA-Tyr3e-0857
NC_008800:2448583:24605332460533246061785Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,tRNA-Tyr3e-0857
NC_015224:2618192:26301462630146263023085Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-Tyr3e-0857
NC_003143:2433190:24407672440767244085185Yersinia pestis CO92, complete genometRNA-Tyr3e-0857
NC_010473:4256000:42731914273191427327585Escherichia coli str. K-12 substr. DH10B, complete genometRNA-Tyr1e-0755.1
NC_010468:4455201:44567734456773445685785Escherichia coli ATCC 8739, complete genometRNA-Tyr1e-0755.1
NC_009832:2969376:29907912990791299087585Serratia proteamaculans 568, complete genometRNA-Tyr1e-0755.1
NC_007946:3683371:36895573689557368963882Escherichia coli UTI89, complete genometRNA-Tyr1e-0755.1
NC_006511:4119332:41337594133759413384082Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtRNA-Tyr1e-0755.1
CU928160:4248621:42646174264617426470185Escherichia coli IAI1 chromosome, complete genometRNA-Tyr1e-0755.1
NC_003198:3586000:35909953590995359107985Salmonella enterica subsp. enterica serovar Typhi str. CT18,tRNA-Tyr1e-0755.1
NC_009832:2969376:29906102990610299069485Serratia proteamaculans 568, complete genometRNA-Tyr1e-0755.1
NC_000913:4159090:41734954173495417357985Escherichia coli K12, complete genometRNA-Tyr1e-0755.1
NC_013421:2453078:24650072465007246509185Pectobacterium wasabiae WPP163, complete genometRNA-Tyr1e-0755.1
NC_011750:4543135:45553174555317455540185Escherichia coli IAI39 chromosome, complete genometRNA-Tyr1e-0755.1
NC_020260:1535394:15362081536208153629285Cronobacter sakazakii Sp291, complete genometRNA-Tyr1e-0755.1
NC_009436:203365:22036422036422044885Enterobacter sp. 638, complete genometRNA-Tyr1e-0755.1
NC_017253:31192:48669486694875385Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,tRNA-Tyr2e-0754.7
NC_016632:1637500:16563041656304165638582Serratia symbiotica str. 'Cinara cedri' chromosome, completetRNA-Tyr2e-0754.3
NC_017259:25400:47913479134799482Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,tRNA-Tyr3e-0753.9
NC_008513:13484:31981319813206282Buchnera aphidicola str. Cc (Cinara cedri), complete genometRNA-Tyr3e-0753.9
NC_014306:2703544:27233642723364272344885Erwinia billingiae Eb661, complete genometRNA-Tyr4e-0753.5
NC_004061:31500:48774487744885582Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometRNA-Tyr7e-0752.8
NC_013440:5509790:55240025524002552408685Haliangium ochraceum DSM 14365, complete genometRNA-Tyr7e-0752.8
NC_009922:2590317:26041352604135260421985Alkaliphilus oremlandii OhILAs, complete genometRNA-Tyr2e-0651.2
NC_004344:589375:59411759411759419882Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,7e-0649.3