Pre_GI: BLASTP Hits

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Query: NC_004088:2366000:2376486 Yersinia pestis KIM, complete genome

Start: 2376486, End: 2376950, Length: 465

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2087487:209818520981852098649465Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-79294
NC_010634:2376245:238700123870012387465465Yersinia pseudotuberculosis PB1/+, complete genomeSecC motif-containing protein1e-79294
NC_008149:1842500:185186918518691852333465Yersinia pestis Nepal516, complete genomehypothetical protein1e-79294
NC_010159:2440947:244860224486022449066465Yersinia pestis Angola, complete genomeSEC-C motif-containing protein1e-79294
NC_008150:1705152:171521717152171715681465Yersinia pestis Antiqua, complete genomehypothetical protein1e-79294
NC_005810:2180303:219107321910732191537465Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-79294
NC_003143:2433190:244325524432552443719465Yersinia pestis CO92, complete genomehypothetical protein1e-79294
NC_017154:2430093:244015824401582440622465Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-79294
NC_006155:2461262:247069924706992471163465Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-79293
NC_008800:2448583:245896324589632459427465Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-62235
NC_015224:2618192:262857926285792629043465Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-60231
NC_015061:2867027:288345928834592883923465Rahnella sp. Y9602 chromosome, complete genomeSEC-C motif domain protein4e-47186
NC_009832:2969376:298901229890122989476465Serratia proteamaculans 568, complete genomeSEC-C motif domain protein4e-47186
NC_013850:2103469:210435421043542104812459Klebsiella variicola At-22 chromosome, complete genomeSEC-C motif domain protein2e-40164
NC_015968:2583721:260027026002702600728459Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein9e-40162
NC_013421:2453078:246617724661772466644468Pectobacterium wasabiae WPP163, complete genomeSEC-C motif domain protein1e-39161
NC_020260:1535394:153763915376391538097459Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-39159
NC_016514:2647984:266468126646812665193513Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YchJ7e-38155
NC_014306:2703544:272180727218072722265459Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-35147
NC_014121:1653385:165427616542761654611336Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-23107
NC_009778:1477841:147873414787341479066333Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-22105
NC_003919:5056650:507993050799305080316387Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-1889.4
NC_015578:3914189:393252939325293933041513Treponema primitia ZAS-2 chromosome, complete genomeSEC-C domain-containing protein7e-1786.3
NC_012969:2476318:251685825168582517238381Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein2e-1684.3
NC_014733:2363838:238575323857532386133381Methylovorus sp. MP688 chromosome, complete genomehypothetical protein2e-1684.3
NC_002947:1268089:128292512829251283407483Pseudomonas putida KT2440, complete genomehypothetical protein4e-1683.6
NC_002937:255790:273943273943274431489Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeSEC-C motif domain protein5e-1683.2
NC_017317:1143378:116394811639481164337390Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-1477
NC_016809:389561:407905407905408387483Haemophilus influenzae 10810, complete genomehypothetical protein7e-1476.3
NC_009662:837500:858841858841859218378Nitratiruptor sp. SB155-2, complete genomehypothetical protein1e-1375.5
NC_008228:2450700:245192024519202452396477Pseudoalteromonas atlantica T6c, complete genomeSEC-C motif containing protein2e-1374.7
NC_014315:1249071:126836212683621268853492Nitrosococcus watsoni C-113 chromosome, complete genomeSEC-C motif domain-containing protein3e-1270.9
NC_013131:10413240:104296981042969810430111414Catenulispora acidiphila DSM 44928, complete genomehypothetical protein4e-1270.5
NC_012590:1446500:145158114515811451979399Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein6e-1166.6
NC_016932:1041306:106345510634551063844390Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein9e-1165.9
NC_014166:3072703:309787230978723098288417Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehypothetical protein2e-1065.1
NC_020156:2750000:275871327587132759105393Nonlabens dokdonensis DSW-6, complete genomeputative Sec-C motif domain protein4e-1063.9
NC_010162:900031:917666917666918166501Sorangium cellulosum 'So ce 56', complete genomehypothetical protein7e-1062.8
NC_014550:301894:319162319162319611450Arthrobacter arilaitensis Re117, complete genomehypothetical protein3e-0961.2
NC_013729:6217500:622845362284536228872420Kribbella flavida DSM 17836, complete genomeSecC motif-containing protein2e-0858.2
NC_008319:2007752:202340620234062023843438Synechococcus sp. CC9311, complete genomeSEC-C motif domain protein4e-0857.4