Pre_GI: BLASTP Hits

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Query: NC_004088:2227278:2240458 Yersinia pestis KIM, complete genome

Start: 2240458, End: 2240832, Length: 375

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:1064227:107229410722941072647354Yersinia pestis Pestoides F chromosome, complete genomedsDNA-mimic protein2e-62237
NC_008149:1842500:187284618728461873199354Yersinia pestis Nepal516, complete genomehypothetical protein2e-62237
NC_008150:1705152:173618517361851736538354Yersinia pestis Antiqua, complete genomehypothetical protein2e-62237
NC_010465:2282874:229161322916132291966354Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF4402e-62237
NC_010159:2252380:225554122555412255864324Yersinia pestis Angola, complete genomehypothetical protein5e-56215
NC_009708:2245586:225435622543562254679324Yersinia pseudotuberculosis IP 31758 chromosome, complete genomedsDNA-mimic protein5e-56215
NC_014029:2138000:214895821489582149281324Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-56215
NC_017160:2054289:207655020765502076873324Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-56215
NC_017168:3290380:329784832978483298171324Yersinia pestis A1122 chromosome, complete genomedsDNA-mimic protein5e-56215
NC_017265:1765399:177935917793591779682324Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative double-stranded DNA mimic5e-56215
NC_020063:2011019:201189020118902012219330Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein9e-53205
NC_007606:1209132:121119912111991211606408Shigella dysenteriae Sd197, complete genomehypothetical protein7e-53205
NC_007384:2007467:202906120290612029468408Shigella sonnei Ss046, complete genomehypothetical protein6e-53205
NC_013850:2103469:212095621209562121285330Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4405e-52202
NC_011283:2185462:218741221874122187741330Klebsiella pneumoniae 342 chromosome, complete genomedsDNA-mimic protein5e-52202
NC_009801:1392696:139568313956831396012330Escherichia coli E24377A, complete genomehypothetical protein5e-52202
NC_013364:1596278:160020016002001600529330Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-52202
NC_014837:2354241:237355623735562373885330Pantoea sp. At-9b chromosome, complete genomehypothetical protein4e-52202
NC_014121:1653385:167088616708861671215330Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-51201
NC_015968:2583721:258372125837212584050330Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein3e-51200
NC_009778:1477841:149717414971741497503330Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-50196
NC_020260:1535394:155607915560791556408330Cronobacter sakazakii Sp291, complete genomedsDNA-mimic protein4e-50196
NC_012779:1629731:163362216336221633960339Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-44176