Pre_GI: BLASTP Hits

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Query: NC_004088:1851500:1870921 Yersinia pestis KIM, complete genome

Start: 1870921, End: 1871886, Length: 966

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1571305:159200115920011592966966Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative dioxygenase subunit beta0666
NC_017168:2941938:296125729612572962222966Yersinia pestis A1122 chromosome, complete genomeputative dioxygenase subunit beta0666
NC_009381:2138625:215242121524212153386966Yersinia pestis Pestoides F chromosome, complete genomedioxygenase beta subunit0666
NC_005810:2549680:256626825662682567233966Yersinia pestis biovar Microtus str. 91001, complete genomeputative dioxygenase beta subunit0666
NC_006155:2979500:299324829932482994213966Yersinia pseudotuberculosis IP 32953, complete genomeputative dioxygenase beta subunit0666
NC_010634:2894631:291118029111802912145966Yersinia pseudotuberculosis PB1/+, complete genomeferredoxin0666
NC_010465:1790739:179195917919591792924966Yersinia pseudotuberculosis YPIII, complete genomeferredoxin0662
NC_009708:1735903:175894417589441759909966Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeoxidoreductase0659
NC_017160:2787637:280841928084192809369951Yersinia pestis D182038 chromosome, complete genomeoxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain-containing protein0655
NC_017986:331610:372319372319373287969Pseudomonas putida ND6 chromosome, complete genomeferredoxin4e-64244
NC_010501:3448389:345377834537783454731954Pseudomonas putida W619, complete genomeferredoxin4e-57221
NC_020209:1986503:200595520059552006908954Pseudomonas poae RE*1-1-14, complete genomeferredoxin6e-57221
NC_020209:1949500:197429119742911975250960Pseudomonas poae RE*1-1-14, complete genomeferredoxin3e-56219
NC_007951:3655088:367691336769133677890978Burkholderia xenovorans LB400 chromosome 1, complete sequenceVanillate O-demethylase reductase subunit, VanB3e-55216
NC_010170:1580832:159031115903111591288978Bordetella petrii, complete genomeVanillate O-demethylase oxidoreductase3e-55216
NC_013209:2384826:239389423938942394853960Acetobacter pasteurianus IFO 3283-01, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017100:2383487:239510123951012396060960Acetobacter pasteurianus IFO 3283-03, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017108:2383370:239243823924382393397960Acetobacter pasteurianus IFO 3283-12, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017111:2383388:239245623924562393415960Acetobacter pasteurianus IFO 3283-32, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017121:2383375:239244323924432393402960Acetobacter pasteurianus IFO 3283-07, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017125:2383467:239508123950812396040960Acetobacter pasteurianus IFO 3283-22, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017146:2383509:239512323951232396082960Acetobacter pasteurianus IFO 3283-26, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_017150:2290681:230164023016402302599960Acetobacter pasteurianus IFO 3283-01-42C, complete genomevanillate O-demethylase oxidoreductase subunit7e-55214
NC_012792:385670:408949408949409914966Variovorax paradoxus S110 chromosome 2, complete genomePhthalate 4,5-dioxygenase6e-54211
NC_011740:810411:819063819063819995933Escherichia fergusonii ATCC 35469, complete genomeVanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)8e-53207
NC_012997:1335902:133794813379481338916969Teredinibacter turnerae T7901, complete genomeputative vanillate O-demethylase oxidoreductase1e-51203
NC_007974:2097334:211653021165302117525996Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin4e-49195
NC_021171:1661923:168394216839421684904963Bacillus sp. 1NLA3E, complete genomevanillate O-demethylase3e-48192
NC_012856:2931995:295331529533152954277963Ralstonia pickettii 12D chromosome 1, complete genomeferredoxin9e-47187
NC_017904:1725180:172518017251801726109930Mycobacterium sp. MOTT36Y chromosome, complete genomeoxidoreductase2e-46186
NC_010086:1907959:193564219356421936610969Burkholderia multivorans ATCC 17616 chromosome 2, completeferredoxin2e-46186
NC_010805:530876:538694538694539662969Burkholderia multivorans ATCC 17616 chromosome 2, completeFAD/NAD(P)-binding oxidoreductase2e-46186
NC_009255:1071868:107976710797671080735969Burkholderia vietnamiensis G4 chromosome 2, complete sequenceferredoxin2e-46186
NC_013757:2858327:2875240287524028775642325Geodermatophilus obscurus DSM 43160, complete genomeferredoxin3e-46185
NC_003296:262118:278338278338279291954Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VANILLATE O-DEMETHYLASE (VANILLATE DEGRADATION FERREDOXIN-LIKE) OXIDOREDUCTASE PROTEIN2e-45182
NC_007650:832507:8520958520958544462352Burkholderia thailandensis E264 chromosome II, complete sequencecytochrome P4504e-45182
NC_007953:314872:315695315695316645951Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative iron-sulfur oxidoreductase, beta subunit6e-45181
NC_007974:2097334:214943221494322150397966Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin2e-44180
NC_013446:1648556:167632916763291677291963Comamonas testosteroni CNB-2, complete genomeferredoxin2e-44179
NC_008043:615049:6183026183026215143213Silicibacter sp. TM1040 mega plasmid, complete sequenceReductive dehalogenase4e-44178
NC_010801:238430:2384302384302407782349Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome P4505e-44178
NC_012522:2623172:262644726264472627400954Rhodococcus opacus B4, complete genomeoxidoreductase2e-43176
NC_007952:3283394:330230733023073303254948Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative vanillate O-demethylase oxidoreductase8e-43174
NC_013757:3012130:3027282302728230282831002Geodermatophilus obscurus DSM 43160, complete genomeferredoxin4e-42171
NC_020302:3014483:302435030243503025300951Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein9e-42171
NC_014640:3808639:381137438113743812318945Achromobacter xylosoxidans A8 chromosome, complete genomephenoxybenzoate dioxygenase subunit beta 21e-40167
NC_018581:759932:789577789577790542966Gordonia sp. KTR9 chromosome, complete genomeFlavodoxin reductases (ferredoxin-NADPH reductases) family 12e-40166
NC_014306:3006028:303941730394173040385969Erwinia billingiae Eb661, complete genomevanillate O-demethylase oxidoreductase3e-40166
NC_007802:4071006:4071006407100640742153210Jannaschia sp. CCS1, complete genomeReductive dehalogenase3e-40165
NC_008786:1507139:153306315330631534040978Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein5e-40165
NC_014839:12519:203192031921281963Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceferredoxin2e-39162
NC_009659:997779:100930010093001010232933Janthinobacterium sp. Marseille chromosome, complete genomeferredoxin/oxidoreductase1e-37157
NC_015968:1618862:163413416341341635099966Enterobacter asburiae LF7a chromosome, complete genomeferredoxin1e-37157
NC_009342:2528426:253142325314232532364942Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-37155
NC_013446:2062862:207993620799362080631696Comamonas testosteroni CNB-2, complete genomeferredoxin9e-37154
NC_015381:1705383:170778417077841708755972Burkholderia gladioli BSR3 chromosome 1, complete sequenceOxidoreductase3e-36152
NC_016514:1627664:164146416414641642417954Enterobacter cloacae EcWSU1 chromosome, complete genomevanillate O-demethylase oxidoreductase8e-36150
NC_020302:146807:1585171585171595241008Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate monooxygenase2e-35149
NC_008343:2050000:205961220596122060361750Granulibacter bethesdensis CGDNIH1, complete genomeflavodoxin reductase family4e-35149
NC_008268:7180663:718648171864817187458978Rhodococcus sp. RHA1, complete genomepossible oxidoreductase3e-32139
NC_014010:1850500:189379618937961894755960Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeferredoxin1e-31137
NC_016906:1565868:157999615799961580943948Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative vanillate O-demethylase oxygenase subunit B3e-30132
NC_012522:3224526:323170532317053232637933Rhodococcus opacus B4, complete genomeoxidoreductase1e-27124
NC_015942:2316354:234477523447752345707933Acidithiobacillus ferrivorans SS3 chromosome, complete genomeferredoxin2e-27122
NC_008786:1507139:1529423152942315304661044Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein7e-26118
NC_016642:4517478:452257045225704523514945Pseudovibrio sp. FO-BEG1 chromosome, complete genomevanillate O-demethylase oxidoreductase8e-26117
NC_015733:2581324:2591522259152225926491128Pseudomonas putida S16 chromosome, complete genomeiron-sulfur cluster-binding protein2e-2099.8
NC_010501:1286971:1308626130862613106562031Pseudomonas putida W619, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding1e-1894
NC_020302:85821:8703287032892482217Corynebacterium halotolerans YIM 70093 = DSM 44683, completecytochrome P450 family protein8e-1788.2
NC_016943:1560000:1569167156916715703481182Blastococcus saxobsidens DD2, complete genomeputative flavodoxin reductase3e-1686.3
NC_018681:2447871:2447871244787124512213351Nocardia brasiliensis ATCC 700358 chromosome, complete genomemolybdopterin dinucleotide-binding region1e-1584.3
NC_011004:1136895:1150461115046111525692109Rhodopseudomonas palustris TIE-1, complete genomeOxidoreductase FAD-binding domain protein4e-1582.4
NC_016147:586433:5988755988756008331959Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeoxidoreductase, FAD-binding protein6e-1582
NC_010612:6113155:6118831611883161208522022Mycobacterium marinum M, complete genomeelectron transfer protein FdxB9e-1581.3
NC_020133:5710661:5714114571411457161352022Mycobacterium liflandii 128FXT, complete genomeelectron transfer protein FdxB9e-1581.3
NC_009434:3611738:3644169364416936463612193Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-1480.9
NC_015638:1824794:1828210182821018292831074Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNitric oxide dioxygenase3e-1479.3
NC_016642:2573481:2576254257625425773121059Pseudovibrio sp. FO-BEG1 chromosome, complete genomephenylacetate-CoA oxygenase/reductase subunit PaaK4e-1479
NC_010681:1234500:1244919124491912470212103Burkholderia phytofirmans PsJN chromosome 1, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein1e-1377.4
NC_013892:114884:1260031260031270881086Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains1e-1377.4
NC_020064:3157656:3181421318142131825481128Serratia marcescens FGI94, complete genomeflavodoxin reductase family protein3e-1376.3
NC_013731:11605:1237212372144382067Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequenceOxidoreductase FAD-binding domain protein8e-1374.7
NC_014228:4408500:4413590441359044147081119Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains1e-1274.3
NC_010674:658596:6611006611006622541155Clostridium botulinum B str. Eklund 17B, complete genomeputative oxidoreductase7e-1271.6
NC_013446:1648556:167066516706651670967303Comamonas testosteroni CNB-2, complete genomehypothetical protein7e-1271.6
NC_007912:4364215:4371101437110143731252025Saccharophagus degradans 2-40, complete genomeoxidoreductase, FAD-binding9e-1271.2
NC_009380:3346132:3357796335779633590101215Salinispora tropica CNB-440 chromosome, complete genomeglobin9e-1271.2
NC_015634:959396:9848139848139859311119Bacillus coagulans 2-6 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein9e-1271.2
NC_010723:622928:6263066263066274601155Clostridium botulinum E3 str. Alaska E43, complete genomeputative oxidoreductase2e-1170.5
NC_009052:1394000:1398381139838113996011221Shewanella baltica OS155, complete genomeOxidoreductase FAD-binding domain protein1e-1170.5
NC_016901:1527877:1532763153276315339291167Shewanella baltica OS678 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein1e-1170.5
NC_007492:6372900:6375166637516663771962031Pseudomonas fluorescens PfO-1, complete genomePyridoxamine 5'-phosphate oxidase-like, FMN-binding2e-1170.1
NC_014310:607896:6370226370226381131092Ralstonia solanacearum PSI07 megaplasmid, complete sequencephenylacetic acid degradation protein3e-1169.7
NC_012808:1920500:1920876192087619229182043Methylobacterium extorquens AM1, complete genomehypothetical protein4e-1169.3
NC_003910:4234000:4236340423634042374371098Colwellia psychrerythraea 34H, complete genomeoxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein7e-1168.6
NC_020164:1784223:1799493179949318006381146Staphylococcus warneri SG1, complete genomehypothetical protein1e-1067.4
NC_011999:728353:7364357364357375771143Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein5e-1065.5
NC_014391:6848475:6865640686564068667611122Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeglobin2e-0963.5
NC_015703:5865921:5892667589266758944781812Runella slithyformis DSM 19594 chromosome, complete genomefatty acid hydroxylase2e-0963.2
NC_016510:1874942:1897246189724618983011056Flavobacterium columnare ATCC 49512 chromosome, complete genomephenylacetic acid degradation NADH oxidoreductase PaaE6e-0962
NC_017506:1100679:1134588113458811356041017Marinobacter adhaerens HP15 chromosome, complete genomeoxidoreductase FAD/NAD(P)-binding domain-containing protein2e-0860.1
NC_016887:1714664:1747213174721317482441032Nocardia cyriacigeorgica GUH-2, complete genomeputative oxido-reductase2e-0859.7
NC_008697:118859:1301211301211311611041Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein3e-0859.7
NC_010512:110932:1284481284481294701023Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein3e-0859.3
NC_006510:1731939:1763762176376217649971236Geobacillus kaustophilus HTA426, complete genomeflavohemoglobin6e-0858.5
NC_009725:2784334:2796779279677927979691191Bacillus amyloliquefaciens FZB42, complete genomeHmp6e-0858.5
NC_020302:85821:904349043490625192Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate O-demethylase5e-0755.5
NC_016147:730810:7433777433777444411065Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeFadD27 protein5e-0755.5
NC_016001:2980245:3003713300371330049091197Flavobacterium branchiophilum, complete genomeNitric oxide dioxygenase6e-0755.5
NC_007350:2460134:2474782247478224759271146Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,flavohemoprotein8e-0754.7
NC_010002:4073724:4081604408160440826831080Delftia acidovorans SPH-1, complete genomeferredoxin1e-0654.3
NC_020302:3014483:3044832304483230459891158Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation NADH oxidoreductase1e-0653.9
NC_016027:123853:1387241387241399441221Gluconacetobacter xylinus NBRC 3288, complete genomeflavohemoprotein2e-0653.5
NC_017098:1278712:1284980128498012862991320Spirochaeta africana DSM 8902 chromosome, complete genomeputative ferric reductase2e-0653.5
NC_008740:3520500:3559242355924235605581317Marinobacter aquaeolei VT8, complete genomeFerric reductase domain protein transmembrane component, N-terminal domain2e-0653.5
NC_011992:773905:7766467766467779891344Acidovorax ebreus TPSY, complete genomeFerric reductase domain protein transmembrane component3e-0653.1
NC_015312:681678:6897476897476908021056Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeferredoxin--NAD(+) reductase3e-0652.8
NC_004129:5781413:5797817579781757989981182Pseudomonas fluorescens Pf-5, complete genomeflavohemoprotein4e-0652.4