Pre_GI: BLASTP Hits

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Query: NC_004088:179775:198944 Yersinia pestis KIM, complete genome

Start: 198944, End: 201775, Length: 2832

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4171500:4189891418989141927222832Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,insecticidal toxin complex protein01831
NC_017160:3986844:4006012400601240088432832Yersinia pestis D182038 chromosome, complete genometoxin subunit01831
NC_005810:4381182:4400692440069244035232832Yersinia pestis biovar Microtus str. 91001, complete genomeputative toxin subunit01831
NC_008149:3966586:3985638398563839885952958Yersinia pestis Nepal516, complete genomeinsecticidal toxin01823
NC_006155:4210606:4230131423013142329892859Yersinia pseudotuberculosis IP 32953, complete genomeputative insecticidal toxin01402
NC_015224:4028150:4045591404559140484882898Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative insecticidal toxin complex protein01063
NC_009997:685726:7157017157017185892889Shewanella baltica OS195, complete genomeYD repeat protein0657
NC_016901:680870:7120947120947149702877Shewanella baltica OS678 chromosome, complete genomehypothetical protein0655
NC_013892:1503162:1536681153668115394792799Xenorhabdus bovienii SS-2004 chromosome, complete genomeinsecticidal toxin complex protein C0642
NC_016818:2927500:2951512295151229544632952Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRHS repeat-associated core domain-containing protein6e-176618
NC_009832:426993:4275344275344300922559Serratia proteamaculans 568, complete genomeYD repeat protein4e-175615
NC_008027:2909000:2924992292499229281533162Pseudomonas entomophila L48, complete genomeinsecticidal toxin1e-161570
NC_007435:191821:2122672122672151252859Burkholderia pseudomallei 1710b chromosome II, complete sequenceTccC41e-155551
NC_007435:191821:2197262197262226952970Burkholderia pseudomallei 1710b chromosome II, complete sequenceTccC32e-146520
NC_014718:232832:2889182889182922383321Burkholderia rhizoxinica HKI 454 chromosome, complete genomehypothetical protein4e-136486
NC_016818:2927500:2932318293231829352662949Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRHS repeat-associated core domain-containing protein8e-133475
NC_007005:4810295:4819501481950148223682868Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat1e-125451
NC_007435:191821:2047842047842120377254Burkholderia pseudomallei 1710b chromosome II, complete sequenceInsecticidal toxin complex protein TcdB21e-124447
NC_007005:4810295:4822412482241248250572646Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat4e-124446
NC_010067:632683:6551096551096579972889Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-115418
NC_014228:2270000:2285221228522122881302910Xenorhabdus nematophila ATCC 19061, complete genomeC component of insecticidal toxin complex (Tc)8e-114412
NC_010067:632683:6519156519156548302916Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-114412
NC_016818:2927500:2948484294848429514833000Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRHS repeat-associated core domain-containing protein3e-108393
NC_014718:232832:2677262677262737256000Burkholderia rhizoxinica HKI 454 chromosome, complete genomeInsecticidal toxin complex protein TcaC2e-90334
NC_010067:660659:6580176580176606622646Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-89330
NC_020418:1397112:1397112139711213999162805Morganella morganii subsp. morganii KT, complete genomePutative insecticidal toxin complex1e-77291
NC_010162:11908749:1193712611937126119443497224Sorangium cellulosum 'So ce 56', complete genomeRhs family protein7e-68259
NC_010830:1794559:1800587180058718081917605Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-63245
NC_010162:9351179:9367135936713593744157281Sorangium cellulosum 'So ce 56', complete genomeinsecticidal toxin complex-like protein1e-62242
NC_021184:3841172:3846829384682938550518223Desulfotomaculum gibsoniae DSM 7213, complete genomeRHS repeat-associated core domain protein7e-51202
NC_008314:1465643:1497361149736115052957935Ralstonia eutropha H16 chromosome 2, complete sequenceinsecticidal toxin complex protein7e-48192
NC_014718:232832:2737362737362748751140Burkholderia rhizoxinica HKI 454 chromosome, complete genomeINSECTICIDAL TOXIN COMPLEX PROTEIN TCCC5e-34147
NC_013440:3977097:39770973977097398746710371Haliangium ochraceum DSM 14365, complete genomeYD repeat protein8e-1790.1
NC_011979:4062000:4071464407146440736232160Geobacter sp. FRC-32, complete genomeYD repeat protein1e-1689.4
NC_010162:9727465:9737770973777097402982529Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein9e-1479.7
NC_010162:9727465:97442389744238975450910272Sorangium cellulosum 'So ce 56', complete genomeRhsA protein precursor6e-1377
NC_009778:3832000:3857813385781338618324020Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1068.9
NC_014738:1742654:1751947175194717610849138Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,yd repeat protein2e-1068.9
NC_020125:2080126:2097145209714521062829138Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-1068.9
NC_017045:1902582:1916458191645819210114554Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,yd repeat protein2e-1068.6
NC_002967:1589069:1600897160089716108599963Treponema denticola ATCC 35405, complete genomeYD repeat protein2e-1068.6
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein3e-1068.2
NC_002967:1589069:1611590161159016149703381Treponema denticola ATCC 35405, complete genomeYD repeat protein4e-1067.8
NC_007645:3343815:3346238334623833503984161Hahella chejuensis KCTC 2396, complete genomeRhs family protein9e-1066.6
NC_002967:2032000:2040824204082420442463423Treponema denticola ATCC 35405, complete genomeYD repeat protein3e-0964.7
NC_002967:2032000:2044846204484620493124467Treponema denticola ATCC 35405, complete genomeYD repeat protein3e-0964.7
NC_019673:2257259:2257259225725922666309372Saccharothrix espanaensis DSM 44229 complete genomeConserved carbohydrate-binding protein6e-0963.9
NC_016631:773511:7781187781187837995682Granulicella mallensis MP5ACTX8 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0863.2
NC_014228:2883500:2914873291487329206655793Xenorhabdus nematophila ATCC 19061, complete genomeputative Rhs family protein2e-0862
NC_008463:1756434:1763497176349717662082712Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0861.6
NC_015311:145215:1466711466711559049234Prevotella denticola F0289 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0861.2
NC_003552:2502689:2534487253448725411406654Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-0860.8
NC_005773:1675793:169294516929451693937993Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRhs family protein4e-0860.8
NC_010162:10894592:1090663210906632109160819450Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein4e-0860.8
NC_014228:2883500:2912494291249429138461353Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-0860.8
NC_010162:10894592:1090296210902962109058532892Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein6e-0860.5
NC_014371:849198:8491988491988514202223Prevotella melaninogenica ATCC 25845 chromosome chromosome II,RHS repeat-associated core domain protein9e-0860.1
NC_014507:1610409:1610409161040916144524044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeYD repeat protein1e-0759.7
NC_011979:4062000:4075522407552240787373216Geobacter sp. FRC-32, complete genomeYD repeat protein1e-0759.3
NC_016109:1305368:1309850130985013168697020Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0758.5
NC_011002:703194:7243577243577286044248Burkholderia cenocepacia J2315 chromosome 3, complete sequenceRHS-family protein3e-0758.2
NC_010162:9727465:9733955973395597368612907Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein3e-0758.2
NC_015311:145215:1632951632951658802586Prevotella denticola F0289 chromosome, complete genomeYD repeat-containing protein3e-0757.8
NC_010501:4311873:4315143431514343193034161Pseudomonas putida W619, complete genomeYD repeat protein3e-0757.8
NC_008312:5278500:5285155528515552947369582Trichodesmium erythraeum IMS101, complete genomeYD repeat protein7e-0757
NC_013722:2476236:2483914248391424858721959Xanthomonas albilineans, complete genomeputative truncated rhs family protein1e-0656.2
NC_007005:5882205:5911246591124659154754230Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat1e-0656.2
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein1e-0656.2
NC_011770:3049830:3071999307199930746352637Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-0656.2
NC_003155:320979:3294523294523365467095Streptomyces avermitilis MA-4680, complete genomelarge secreted protein1e-0655.8
NC_015311:145215:1602341602341618291596Prevotella denticola F0289 chromosome, complete genome1e-0655.8
NC_014972:1621850:1639704163970416464836780Desulfobulbus propionicus DSM 2032 chromosome, complete genomeYD repeat-containing protein1e-0655.8
NC_011979:1128986:1135225113522511392714047Geobacter sp. FRC-32, complete genomeYD repeat protein2e-0655.1
NC_011770:1811874:1817099181709918197562658Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0654.7
NC_005773:5734733:5751579575157957557844206Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRHS family protein3e-0654.7
NC_010506:1835910:1841082184108218422571176Shewanella woodyi ATCC 51908, complete genomehypothetical protein5e-0654.3
NC_018080:2732962:2740330274033027431252796Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-0654.3
NC_011313:871445:8752568752568788763621Aliivibrio salmonicida LFI1238 chromosome 2, complete sequence6e-0653.9
NC_013851:608089:6168016168016180721272Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein6e-0653.9
NC_011567:2468708:2479021247902124807121692Anoxybacillus flavithermus WK1, complete genomeRhs family protein6e-0653.9
NC_007005:5882205:5916253591625359176951443Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat8e-0653.5
NC_005085:1498000:1507847150784715123884542Chromobacterium violaceum ATCC 12472, complete genomeprobable Rhs-family protein7e-0653.5
NC_003296:168506:1722961722961774285133Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN7e-0653.5
NC_011979:4062000:4081438408143840853043867Geobacter sp. FRC-32, complete genomeYD repeat-containing protein7e-0653.5
NC_013722:2476236:2487015248701524923545340Xanthomonas albilineans, complete genomeputative rhs family protein7e-0653.5
NC_011663:4943179:496454749645474965497951Shewanella baltica OS223 chromosome, complete genomehypothetical protein9e-0653.1