Pre_GI: BLASTP Hits

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Query: NC_004088:1387276:1389941 Yersinia pestis KIM, complete genome

Start: 1389941, End: 1390627, Length: 687

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3063016:307868530786853079371687Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,urease accessory protein5e-122436
NC_009708:1284555:128527212852721285958687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeurease accessory protein UreF6e-122436
NC_005810:2739878:274260927426092743295687Yersinia pestis biovar Microtus str. 91001, complete genomeurease accessory protein5e-122436
NC_010465:1273000:127384112738411274527687Yersinia pseudotuberculosis YPIII, complete genomeUrease accessory protein UreF5e-122436
NC_006155:3456488:347234034723403473026687Yersinia pseudotuberculosis IP 32953, complete genomeurease accessory protein5e-122436
NC_008150:2681327:268405826840582684744687Yersinia pestis Antiqua, complete genomeurease accessory protein5e-122436
NC_010159:3779129:377984637798463780532687Yersinia pestis Angola, complete genomeurease accessory protein UreF5e-122436
NC_010634:3368000:338599733859973386683687Yersinia pseudotuberculosis PB1/+, complete genomeurease accessory protein UreF5e-122436
NC_003143:2992295:299502629950262995712687Yersinia pestis CO92, complete genomeurease accessory protein5e-122436
NC_008149:1317109:131984013198401320526687Yersinia pestis Nepal516, complete genomeurease accessory protein5e-122436
NC_009381:1783886:180074618007461801432687Yersinia pestis Pestoides F chromosome, complete genomeurease accessory protein5e-122436
NC_014029:3047506:305023730502373050923687Yersinia pestis Z176003 chromosome, complete genomeurease accessory protein5e-122436
NC_017154:2999841:301551030155103016196687Yersinia pestis D106004 chromosome, complete genomeurease accessory protein5e-122436
NC_017168:2751027:276669627666962767382687Yersinia pestis A1122 chromosome, complete genomeurease accessory protein5e-122436
NC_012779:1966205:198097419809741981666693Edwardsiella ictaluri 93-146, complete genomeurease accessory protein F, putative2e-81301
NC_008212:2978786:300448330044833005205723Haloquadratum walsbyi DSM 16790, complete genomeurease accessory protein3e-1582
NC_010681:74587:745877458775306720Burkholderia phytofirmans PsJN chromosome 1, complete sequenceUrease accessory protein UreF9e-1373.6
NC_004369:1051013:105839710583971059086690Corynebacterium efficiens YS-314, complete genomeurease accessory protein UreF1e-0963.2
NC_012988:4292815:432597043259704326677708Methylobacterium extorquens DM4, complete genomeurease accessory protein UreF1e-0963.2
NC_012704:947409:949149949149949952804Corynebacterium kroppenstedtii DSM 44385, complete genomeurease accessory protein2e-0962.4
NC_014006:924417:943155943155943850696Sphingobium japonicum UT26S chromosome 1, complete genomeurease accessory protein7e-0857.4
NC_011886:404661:415732415732416415684Arthrobacter chlorophenolicus A6, complete genomeUrease accessory protein UreF3e-0652
NC_007510:913411:930380930380931060681Burkholderia sp. 383 chromosome 1, complete sequenceUrease accessory protein UreF8e-0650.8