Pre_GI: BLASTP Hits

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Query: NC_004088:1291754:1313818 Yersinia pestis KIM, complete genome

Start: 1313818, End: 1314207, Length: 390

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008150:2785830:279282927928292793212384Yersinia pestis Antiqua, complete genomehypothetical protein1e-65248
NC_003143:2895617:291768629176862918069384Yersinia pestis CO92, complete genomecamphor resistance protein CrcB1e-65248
NC_008800:3279468:328209532820953282478384Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,camphor resistance protein CrcB9e-57218
NC_015224:1440283:145549814554981455881384Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-56218
NC_020064:1150982:116839911683991168782384Serratia marcescens FGI94, complete genomecamphor resistance protein CrcB7e-39159
NC_016860:4024000:402423040242304024610381Salmonella enterica subsp. enterica serovar Typhimurium strcamphor resistance protein CrcB3e-31133
NC_011747:11532:149651496515345381Escherichia coli S88 plasmid pECOS88, complete sequencecamphor resistance protein CrcB3e-31133
NC_016816:4129299:416613841661384166518381Pantoea ananatis LMG 5342, complete genomecamphor resistance protein CrcB3e-30130
NC_014304:77715:923809238092754375Erwinia billingiae Eb661 plasmid pEB102, complete sequencecamphor resistance CrcB family protein3e-30130
NC_014121:489500:495680495680496054375Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative CrcB-like protein8e-30129
NC_017986:331610:343424343424343807384Pseudomonas putida ND6 chromosome, complete genomecamphor resistance protein CrcB3e-29126
NC_014733:2851984:810881088491384Methylovorus sp. MP688 chromosome, complete genomecrcb protein2e-27120
NC_014972:1923035:192493019249301925310381Desulfobulbus propionicus DSM 2032 chromosome, complete genomecamphor resistance protein CrcB2e-25114
NC_005090:1082213:109569010956901096076387Wolinella succinogenes DSM 1740, complete genomecamphor resistance protein CrcB5e-25112
NC_012724:829830:844812844812845198387Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein6e-23106
NC_009074:2970435:297262129726212973007387Burkholderia pseudomallei 668 chromosome I, complete sequencecrcB protein1e-2098.6
NC_011883:1314624:132598513259851326374390Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,CrcB protein3e-1993.6
NC_013851:859396:860473860473860856384Allochromatium vinosum DSM 180 chromosome, complete genomeCrcB protein9e-1785.5
NC_014935:711765:732375732375732758384Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecamphor resistance protein crcb3e-1684
NC_013894:1194458:121254412125441212918375Thermocrinis albus DSM 14484 chromosome, complete genomeCrcB protein4e-1580.1
NC_015577:786155:788233788233788610378Treponema azotonutricium ZAS-9 chromosome, complete genomeCrcB protein3e-1373.9
NC_015958:57957:626596265963060402Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeCrcB-like protein8e-1372.4
NC_015931:857327:858514858514858960447Pyrolobus fumarii 1A, complete genomeCrcB protein2e-1270.9
NC_010002:3887926:390905339090533909439387Delftia acidovorans SPH-1, complete genomeCrcB protein4e-1270.1
NC_009727:1001203:101806310180631018437375Coxiella burnetii Dugway 7E9-12, complete genomecrcB protein9e-1268.9
NC_011528:767940:783894783894784268375Coxiella burnetii CbuK_Q154, complete genomeCrcB family protein1e-1168.6
NC_013203:472679:490302490302490673372Atopobium parvulum DSM 20469, complete genomeCrcB protein3e-1167
NC_014964:2237979:225763522576352258039405Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeCrcB protein3e-1167
NC_014538:33718:405494054940953405Thermoanaerobacter sp. X513 chromosome, complete genomeCrcB protein3e-1167
NC_010320:33814:406454064541049405Thermoanaerobacter sp. X514 chromosome, complete genomeCrcB protein3e-1167
NC_010321:2256758:227049122704912270895405Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCrcB protein3e-1167
NC_013921:36000:430634306343464402Thermoanaerobacter italicus Ab9 chromosome, complete genomeCrcB protein4e-1166.6
NC_015474:72103:774877748777861375Pyrococcus sp. NA2 chromosome, complete genomecamphor resistance protein CrcB5e-1166.2
NC_014834:959986:989471989471989851381Rhodopseudomonas palustris DX-1 chromosome, complete genomecamphor resistance CrcB protein7e-1165.9
NC_014209:81643:101443101443101844402Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CrcB protein8e-1165.9
NC_014166:401815:403684403684404070387Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecamphor resistance CrcB protein8e-1165.9
NC_006087:28490:675526755267965414Leifsonia xyli subsp. xyli str. CTCB07, complete genomeintegral membrane protein1e-1065.5
NC_021175:353292:354725354725355051327Streptococcus oligofermentans AS 1.3089, complete genomecamphor resistance protein CrcB2e-1064.7
NC_014758:1387470:140549514054951405863369Calditerrivibrio nitroreducens DSM 19672 chromosome, completecamphor resistance protein crcb2e-1064.7
NC_006361:4597718:462346346234634623891429Nocardia farcinica IFM 10152, complete genomecamphor resistance protein CrcB3e-1063.9
NC_014814:3926676:394193039419303942325396Mycobacterium sp. Spyr1 chromosome, complete genomecamphor resistance protein CrcB3e-1063.9
NC_014364:3707311:373119937311993731558360Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCrcB protein4e-1063.5
NC_014217:1352777:135571013557101356111402Starkeya novella DSM 506 chromosome, complete genomeCrcB protein7e-1062.8
NC_011565:1022000:102737210273721027749378Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,protein CrcB-homolog6e-1062.8
NC_009785:1414892:143102914310291431355327Streptococcus gordonii str. Challis substr. CH1, complete genomeCrcB-like integral membrane protein1e-0962
NC_009464:251550:262714262714263067354Uncultured methanogenic archaeon RC-I, complete genomeputative camphor resistance protein2e-0961.2
NC_004088:1387276:139715913971591397569411Yersinia pestis KIM, complete genomecamphor resistance protein CrcB3e-0960.8
NC_010159:3779129:378704437870443787448405Yersinia pestis Angola, complete genomecrcB homolog3e-0960.5
NC_010465:1273000:128105112810511281455405Yersinia pseudotuberculosis YPIII, complete genomeCamphor resistance CrcB protein3e-0960.5
NC_010634:3368000:337887833788783379282405Yersinia pseudotuberculosis PB1/+, complete genomecamphor resistance CrcB protein3e-0960.5
NC_003143:2992295:300224430022443002648405Yersinia pestis CO92, complete genomecamphor resistance protein CrcB3e-0960.5
NC_008150:2681327:269127626912762691680405Yersinia pestis Antiqua, complete genomehypothetical protein3e-0960.5
NC_005810:2739878:274982227498222750226405Yersinia pestis biovar Microtus str. 91001, complete genomecamphor resistance protein CrcB3e-0960.5
NC_015555:49842:568935689357294402Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCrcB-like protein3e-0960.5
NC_006155:3456488:346522134652213465625405Yersinia pseudotuberculosis IP 32953, complete genomecamphor resistance protein CrcB3e-0960.5
NC_008149:1317109:132705813270581327462405Yersinia pestis Nepal516, complete genomemembrane protein3e-0960.5
NC_017265:3063016:307174930717493072153405Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-0960.5
NC_017168:2751027:275976027597602760164405Yersinia pestis A1122 chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_017160:2976683:298242929824292982833405Yersinia pestis D182038 chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_017154:2999841:300857430085743008978405Yersinia pestis D106004 chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_014029:3047506:305745530574553057859405Yersinia pestis Z176003 chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_009708:1284555:129267212926721293076405Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_009381:1783886:179379117937911794195405Yersinia pestis Pestoides F chromosome, complete genomecamphor resistance protein CrcB3e-0960.5
NC_007498:1148249:115363811536381154009372Pelobacter carbinolicus DSM 2380, complete genomeCrcB protein7e-0959.3
NC_010337:1188373:120007512000751200512438Heliobacterium modesticaldum Ice1, complete genomecrcb protein, putative1e-0858.9
NC_019974:192862:215438215438215869432Natronococcus occultus SP4, complete genomeIntegral membrane protein possibly involved in chromosome condensation1e-0858.5
NC_014410:51711:582345823458635402Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CrcB protein2e-0857.8
NC_009616:183772:193594193594193971378Thermosipho melanesiensis BI429 chromosome, complete genomeCrcB protein3e-0857.4
NC_019970:35985:437844378444185402Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecrcB protein3e-0857.4
NC_010610:1178430:119287311928731193205333Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-0857
NC_013947:6221877:623403862340386234418381Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCrcB protein4e-0857
NC_015320:1342105:135593813559381356318381Archaeoglobus veneficus SNP6 chromosome, complete genomeCrcB-like protein4e-0856.6
NC_014410:51711:586355863559006372Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CrcB protein9e-0855.8
NC_015733:3736104:383283138328313833205375Pseudomonas putida S16 chromosome, complete genomecamphor resistance protein CrcB1e-0755.5
NC_002947:4484824:451009145100914510465375Pseudomonas putida KT2440, complete genomecrcB protein1e-0755.5
NC_013743:375459:398860398860399222363Haloterrigena turkmenica DSM 5511, complete genomeCrcB protein1e-0755.5
NC_007955:1498777:150016215001621500539378Methanococcoides burtonii DSM 6242, complete genomeCamphor resistance CrcB protein9e-0855.5
NC_019970:35985:441854418544556372Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecrcB protein1e-0755.1
NC_009482:87193:934359343593848414Synechococcus sp. RCC307 chromosome, complete genomehypothetical protein1e-0755.1
NC_013520:1905554:190953819095381909918381Veillonella parvula DSM 2008, complete genomeCrcB protein3e-0753.9
NC_015672:2102580:211539621153962115776381Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCrcB-like protein4e-0753.5
NC_016027:1357659:136201313620131362429417Gluconacetobacter xylinus NBRC 3288, complete genomeintegral membrane protein5e-0753.1
NC_009465:29735:522395223952631393Candidatus Vesicomyosocius okutanii HA, complete genomehypothetical protein6e-0753.1
NC_013947:6221877:623441562344156234769355Stackebrandtia nassauensis DSM 44728 chromosome, complete genome7e-0752.8
NC_009785:1414892:143135214313521431726375Streptococcus gordonii str. Challis substr. CH1, complete genomeCrcB-like integral membrane protein7e-0752.8
NC_015555:49842:572945729457665372Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCrcB-like protein1e-0652
NC_014643:892138:913014913014913463450Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein1e-0652
NC_015160:2239933:226713722671372267505369Odoribacter splanchnicus DSM 20712 chromosome, complete genomeCrcB-like protein1e-0651.6
NC_015957:5136500:513868551386855139059375Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrcB-like protein2e-0651.6
NC_005071:87907:141202141202141576375Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein3e-0650.4
NC_014314:238043:275392275392275718327Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete4e-0650.1
NC_010125:3854957:385792238579223858344423Gluconacetobacter diazotrophicus PAl 5, complete genomeputative chromosome condensation protein5e-0650.1
NC_021175:353292:354354354354354728375Streptococcus oligofermentans AS 1.3089, complete genomecamphor resistance protein CrcB9e-0648.9
NC_006361:4597718:462391146239114624333423Nocardia farcinica IFM 10152, complete genomecamphor resistance protein CrcB9e-0648.9