Pre_GI: BLASTP Hits

Some Help

Query: NC_004061:146862:161309 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 161309, End: 161578, Length: 270

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017256:144854:160729160729160998270Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,30S ribosomal protein S203e-28123
NC_002528:148274:160640160640160909270Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete30S ribosomal protein S204e-27119
NC_011833:147426:160658160658160927270Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_011834:156197:160673160673160942270Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_017252:155166:160667160667160936270Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_017253:155170:160670160670160939270Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_017254:156215:160689160689160958270Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_017255:156195:160670160670160939270Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S204e-27119
NC_017259:148346:152287152287152550264Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,30S ribosomal protein S201e-26118
CP002516:4081484:408759640875964087859264Escherichia coli KO11, complete genomeribosomal protein S208e-23105
NC_011750:12047:290262902629289264Escherichia coli IAI39 chromosome, complete genome30S ribosomal protein S208e-23105
NC_002655:12000:252212522125484264Escherichia coli O157:H7 EDL933, complete genome30S ribosomal protein S208e-23105
NC_010468:3970995:397714439771443977407264Escherichia coli ATCC 8739, complete genomeribosomal protein S208e-23105
NC_002695:12000:252202522025483264Escherichia coli O157:H7 str. Sakai, complete genome30S ribosomal protein S208e-23105
NC_011751:12000:251732517325436264Escherichia coli UMN026 chromosome, complete genome30S ribosomal protein S208e-23105
NC_007384:16500:279812798128244264Shigella sonnei Ss046, complete genome30S ribosomal subunit protein S208e-23105
NC_011748:11394:227762277623039264Escherichia coli 55989, complete genome30S ribosomal protein S208e-23105
CP002185:11921:240432404324306264Escherichia coli W, complete genome30S ribosomal subunit protein S208e-23105
CU928145:11394:227762277623039264Escherichia coli 55989 chromosome, complete genome30S ribosomal subunit protein S208e-23105
NC_009800:12162:241112411124374264Escherichia coli HS, complete genomeribosomal protein S208e-23105
CU928160:11381:227642276423027264Escherichia coli IAI1 chromosome, complete genome30S ribosomal subunit protein S208e-23105
NC_009801:11921:240302403024293264Escherichia coli E24377A, complete genomeribosomal protein S208e-23105
AP010958:12660:240422404224305264Escherichia coli O103:H2 str. 12009 DNA, complete genome30S ribosomal subunit protein S208e-23105
NC_016902:4081484:408759640875964087859264Escherichia coli KO11FL chromosome, complete genome30S ribosomal protein S208e-23105
NC_016822:15401:272012720127464264Shigella sonnei 53G, complete genome30S ribosomal protein S208e-23105
NC_013941:12000:252022520225465264Escherichia coli O55:H7 str. CB9615 chromosome, complete genome30S ribosomal protein S208e-23105
NC_013364:11382:227572275723020264Escherichia coli O111:H- str. 11128, complete genome30S ribosomal protein S208e-23105
NC_013361:11382:227732277323036264Escherichia coli O26:H11 str. 11368 chromosome, complete genome30S ribosomal protein S208e-23105
NC_013353:12660:240422404224305264Escherichia coli O103:H2 str. 12009, complete genome30S ribosomal protein S208e-23105
NC_013008:11938:252212522125484264Escherichia coli O157:H7 str. TW14359 chromosome, complete genome30S ribosomal protein S208e-23105
NC_012967:12161:248872488725150264Escherichia coli B str. REL606 chromosome, complete genome30S ribosomal protein S208e-23105
NC_012947:3753375:375857237585723758835264Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete30S ribosomal protein S208e-23105
NC_011741:11381:227642276423027264Escherichia coli IAI1 chromosome, complete genome30S ribosomal protein S208e-23105
NC_011415:11381:227622276223025264Escherichia coli SE11 chromosome, complete genome30S ribosomal protein S208e-23105
NC_011353:12000:252212522125484264Escherichia coli O157:H7 str. EC4115 chromosome, complete genome30S ribosomal protein S208e-23105
NC_011283:4767269:478964447896444789907264Klebsiella pneumoniae 342 chromosome, complete genome30S ribosomal protein S209e-23105
NC_008149:402599:422290422290422553264Yersinia pestis Nepal516, complete genome30S ribosomal protein S203e-22103
NC_008150:4561633:458132445813244581587264Yersinia pestis Antiqua, complete genome30S ribosomal protein S203e-22103
NC_006155:713174:730397730397730660264Yersinia pseudotuberculosis IP 32953, complete genome30S ribosomal protein S203e-22103
NC_003143:483395:503087503087503350264Yersinia pestis CO92, complete genome30S ribosomal protein S203e-22103
NC_004347:3670145:369147636914763691742267Shewanella oneidensis MR-1, complete genomeribosomal protein S203e-2097.1
NC_008322:3585601:360713336071333607399267Shewanella sp. MR-7, complete genomeribosomal protein S203e-2097.1
NC_009092:1263964:126396412639641264230267Shewanella loihica PV-4, complete genomeribosomal protein S205e-2096.7
NC_015424:3890293:391210939121093912372264Aeromonas veronii B565 chromosome, complete genome30S ribosomal protein S209e-2095.5
NC_015633:2565753:256851125685112568840330Vibrio anguillarum 775 chromosome chromosome I, complete sequence30S ribosomal protein S20P3e-1787.4
NC_015662:110950:114225114225114509285Buchnera aphidicola (Cinara tujafilina) chromosome, complete30S ribosomal protein S201e-1685.1
NC_007484:3429140:343324634332463433509264Nitrosococcus oceani ATCC 19707, complete genomeRibosomal protein S20p2e-1581.3
NC_014315:3278386:327952532795253279788264Nitrosococcus watsoni C-113 chromosome, complete genome30S ribosomal protein S207e-1579.3
NC_018080:5192264:521407152140715214346276Pseudomonas aeruginosa DK2 chromosome, complete genome30S ribosomal protein S201e-1478.6
NC_008463:5364428:538512753851275385402276Pseudomonas aeruginosa UCBPP-PA14, complete genomeribosomal protein S201e-1478.6
NC_019940:2931500:293642629364262936689264Thioflavicoccus mobilis 8321 chromosome, complete genome30S ribosomal protein S201e-1478.2
NC_005061:96536:130753130753131019267Candidatus Blochmannia floridanus, complete genome30S ribosomal protein S206e-1475.9
NC_010102:25893:466254662546810186Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1476.3
NC_004545:141478:156975156975157235261Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome30S ribosomal protein S201e-1375.1
NC_010184:4155345:417525841752584175515258Bacillus weihenstephanensis KBAB4, complete genomeribosomal protein S204e-1373.2
NC_014532:349384:365648365648365914267Halomonas elongata DSM 2581, complete genome30S ribosomal protein S206e-1372.8
NC_015731:867377:882209882209882472264Nitrosomonas sp. Is79A3 chromosome, complete genome30S ribosomal protein S201e-1272
NC_003997:4116944:413659341365934136859267Bacillus anthracis str. Ames, complete genome30S ribosomal protein S202e-1271.2
NC_007530:4117071:413672041367204136986267Bacillus anthracis str. 'Ames Ancestor', complete genome30S ribosomal protein S202e-1271.2
NC_004722:4244730:426310242631024263359258Bacillus cereus ATCC 14579, complete genome30S ribosomal protein S202e-1271.2
NC_012472:4119192:414106441410644141321258Bacillus cereus 03BB102, complete genome30S ribosomal protein S202e-1271.2
NC_011658:4107501:412957041295704129827258Bacillus cereus AH187 chromosome, complete genome30S ribosomal protein S202e-1271.2
NC_011725:4288309:430667643066764306933258Bacillus cereus B4264 chromosome, complete genome30S ribosomal protein S202e-1271.2
NC_012659:4116971:413662941366294136886258Bacillus anthracis str. A0248, complete genome30S ribosomal protein S202e-1271.2
NC_014171:4178746:419684541968454197102258Bacillus thuringiensis BMB171 chromosome, complete genome30S ribosomal protein S202e-1271.2
NC_005957:4104880:412449241244924124794303Bacillus thuringiensis serovar konkukian str. 97-27, complete30S ribosomal protein S203e-1270.9
NC_008600:4101748:412357541235754123877303Bacillus thuringiensis str. Al Hakam, complete genome30S ribosomal protein S203e-1270.9
NC_015222:1749553:176301917630191763282264Nitrosomonas sp. AL212 chromosome, complete genome30S ribosomal protein S204e-1270.1
NC_017208:4294341:431270943127094312966258Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete30S ribosomal protein S205e-1269.7
NC_011772:4255161:427350942735094273766258Bacillus cereus G9842, complete genomeribosomal protein S205e-1269.7
NC_014909:121771:136243136243136509267Candidatus Blochmannia vafer str. BVAF chromosome, complete genome30S ribosomal protein S202e-1167.4
NC_009952:3522370:354373935437393544005267Dinoroseobacter shibae DFL 12, complete genomeribosomal protein S203e-1167
NC_007298:3271071:327769532776953277964270Dechloromonas aromatica RCB, complete genome30S ribosomal protein S204e-1166.6
NC_010943:1332243:136779513677951368064270Stenotrophomonas maltophilia K279a, complete genomeputative 30S ribosomal protein S206e-1166.2
NC_008702:2378890:239634823963482396614267Azoarcus sp. BH72, complete genome30S ribosomal protein S203e-1063.5
NC_010617:1467000:146709414670941467354261Kocuria rhizophila DC2201, complete genome30S ribosomal protein S203e-1063.5
NC_010172:5447189:547012154701215470387267Methylobacterium extorquens PA1, complete genomeribosomal protein S206e-1062.8
NC_011757:5742290:359359625267Methylobacterium chloromethanicum CM4, complete genomeribosomal protein S206e-1062.8
NC_014314:1:165116511905255Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete30S ribosomal protein S209e-1062.4
NC_007798:703922:703922703922704185264Neorickettsia sennetsu str. Miyayama, complete genomeribosomal protein S202e-0961.6
NC_015656:1876627:189820018982001898469270Frankia symbiont of Datisca glomerata chromosome, complete genome30S ribosomal protein S203e-0960.5
NC_009667:2860818:277277543267Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence30S ribosomal protein S204e-0960.1
NC_009659:2849000:285072128507212850984264Janthinobacterium sp. Marseille chromosome, complete genome30S ribosomal protein S206e-0959.7
NC_013009:721823:721823721823722086264Neorickettsia risticii str. Illinois, complete genomeribosomal protein S208e-0958.9
NC_021182:2192718:219576721957672196033267Clostridium pasteurianum BC1, complete genomeribosomal protein S201e-0858.5
NC_007645:6049340:607307060730706073339270Hahella chejuensis KCTC 2396, complete genomeribosomal protein S201e-0858.9
NC_006361:1547034:156871415687141568974261Nocardia farcinica IFM 10152, complete genome30S ribosomal protein S202e-0858.2
NC_015519:1113095:113487511348751135147273Tepidanaerobacter sp. Re1 chromosome, complete genome30S ribosomal protein S206e-0856.2
NC_020300:131782:137335137335137601267Bartonella australis Aust/NH1, complete genome30S ribosomal protein S208e-0855.8
NC_010001:2836995:285839628583962858659264Clostridium phytofermentans ISDg, complete genomeribosomal protein S201e-0755.1
NC_010718:1229355:124678712467871247053267Natranaerobius thermophilus JW/NM-WN-LF, complete genomeSSU ribosomal protein S20P1e-0755.5
NC_009511:5362705:538183953818395382102264Sphingomonas wittichii RW1 chromosome, complete genome30S ribosomal protein S201e-0755.5
NC_005956:152497:157800157800158066267Bartonella henselae str. Houston-1, complete genome30S ribosomal protein S202e-0754.7
NC_008593:1704207:172316517231651723431267Clostridium novyi NT, complete genomeribosomal protein S204e-0753.5
NC_005955:139907:145233145233145499267Bartonella quintana str. Toulouse, complete genome30S ribosomal protein S209e-0752.4
NC_011374:325507:353172353172353426255Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome,30S ribosomal protein S202e-0650.8
NC_013192:1886337:188737018873701887636267Leptotrichia buccalis DSM 1135, complete genomeribosomal protein S203e-0650.4
NC_012563:3374904:339544233954423395708267Clostridium botulinum A2 str. Kyoto, complete genomeribosomal protein S203e-0650.8
NC_009697:3071198:309173630917363092002267Clostridium botulinum A str. ATCC 19397 chromosome, complete30S ribosomal protein S203e-0650.8
NC_009699:3178222:319936231993623199628267Clostridium botulinum F str. Langeland chromosome, complete genome30S ribosomal protein S203e-0650.8
NC_017297:3178378:319951731995173199783267Clostridium botulinum F str. 230613 chromosome, complete genome30S ribosomal protein S203e-0650.8
NC_002162:333303:355093355093355347255Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomeribosomal protein S203e-0650.8
NC_010503:327517:355132355132355386255Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete30S ribosomal protein S203e-0650.8
NC_013939:1535071:155228315522831552558276Deferribacter desulfuricans SSM1, complete genome30S ribosomal protein S203e-0650.4