Pre_GI: BLASTP Hits

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Query: NC_004061:146862:148228 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome

Start: 148228, End: 149052, Length: 825

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is the symbiont of the aphid Schizaphis graminum and contains a large circular chromosome. Aphid endosymbiont. Almost all aphids contain maternally transmitted bacteriocyte cells, which themselves contain bacteria called Buchnera. The aphids live on a restricted diet (plant sap), rich in carbohydrates, but poor in nitrogenous or other essential compounds. It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010611:3381500:340338334033833404195813Acinetobacter baumannii ACICU, complete genomeDimethyladenosine transferase (rRNA methylation)1e-55216
NC_012034:438000:444074444074444949876Anaerocellum thermophilum DSM 6725, complete genomedimethyladenosine transferase8e-32137
NC_015164:2961906:298257529825752983375801Bacteroides salanitronis DSM 18170 chromosome, complete genomerRNA (adenine-N(6)-)-methyltransferase3e-0962.4
NC_008783:507939:507118507118507948831Bartonella bacilliformis KC583, complete genomedimethyladenosine transferase5e-31134
NC_010581:709626:736755736755737648894Beijerinckia indica subsp. indica ATCC 9039, complete genomedimethyladenosine transferase3e-36152
NC_011833:147426:147426147426148247822Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,dimethyladenosine transferase1e-95349
NC_017256:144854:147528147528148352825Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,dimethyladenosine transferase6e-98357
NC_004545:141478:144271144271145053783Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomedimethyladenosine transferase1e-65249
NC_014652:2323598:234527023452702346118849Caldicellulosiruptor hydrothermalis 108 chromosome, completedimethyladenosine transferase7e-31134
NC_014721:373607:376593376593377441849Caldicellulosiruptor kristjanssonii 177R1B chromosome, completedimethyladenosine transferase9e-31134
NC_014720:2420455:245297024529702453818849Caldicellulosiruptor kronotskyensis 2002 chromosome, completedimethyladenosine transferase6e-32137
NC_015949:2101302:212155521215552122403849Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeribosomal RNA small subunit methyltransferase A9e-31134
NC_014392:412916:419332419332420180849Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomedimethyladenosine transferase4e-33141
NC_014657:291567:294279294279295127849Caldicellulosiruptor owensensis OL chromosome, complete genomedimethyladenosine transferase3e-33142
NC_003912:1742370:175950617595061760306801Campylobacter jejuni RM1221, complete genomedimethyladenosine transferase2e-1583.2
NC_009707:1811650:182778918277891828589801Campylobacter jejuni subsp. doylei 269.97 chromosome, completedimethyladenosine transferase1e-1583.6
NC_008787:1582110:159826615982661599066801Campylobacter jejuni subsp. jejuni 81-176, complete genomedimethyladenosine transferase2e-1583.2
NC_017279:1603916:162105316210531621853801Campylobacter jejuni subsp. jejuni IA3902 chromosome, completedimethyladenosine transferase3e-1582.8
NC_014802:1631483:164764916476491648449801Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completedimethyladenosine transferase3e-1582.4
NC_017280:1584961:160031416003141601114801Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeDimethyladenosine transferase3e-1582.4
NC_002163:1607360:162365916236591624459801Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomedimethyladenosine transferase3e-1582.8
NC_017281:1645903:166303916630391663839801Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeDimethyladenosine transferase2e-1583.2
NC_011831:2795819:279581927958192796691873Chloroflexus aggregans DSM 9485, complete genomedimethyladenosine transferase1e-22107
NC_003030:3112931:312319531231953124025831Clostridium acetobutylicum ATCC 824, complete genomeDimethyladenosine transferase8e-32137
NC_017295:3110748:312245231224523123315864Clostridium acetobutylicum EA 2018 chromosome, complete genomedimethyladenosine transferase9e-32137
NC_009617:68779:777297772978574846Clostridium beijerinckii NCIMB 8052 chromosome, complete genomedimethyladenosine transferase4e-31135
NC_012658:99899:109255109255110082828Clostridium botulinum Ba4 str. 657 chromosome, complete genomedimethyladenosine transferase5e-33141
NC_011898:189498:193822193822194694873Clostridium cellulolyticum H10, complete genomedimethyladenosine transferase3e-32138
NC_015275:820723:821728821728822594867Clostridium lentocellum DSM 5427 chromosome, complete genomedimethyladenosine transferase4e-32138
NC_010545:2229125:224112322411232241977855Corynebacterium urealyticum DSM 7109, complete genome23S rRNA adenine N-6-methyltransferase8e-1374.3
NC_016629:3396500:342782734278273428624798Desulfovibrio africanus str. Walvis Bay chromosome, completeribosomal RNA small subunit methyltransferase A5e-30131
NC_014836:2527000:254497925449792545791813Desulfurispirillum indicum S5 chromosome, complete genomedimethyladenosine transferase3e-27122
NC_015185:792933:795874795874796635762Desulfurobacterium thermolithotrophum DSM 11699 chromosome,ribosomal RNA small subunit methyltransferase A7e-24111
NC_011297:1296968:131843413184341319273840Dictyoglomus thermophilum H-6-12, complete genomedimethyladenosine transferase5e-28124
NC_019904:186056:200699200699201481783Echinicola vietnamensis DSM 17526 chromosome, complete genomedimethyladenosine transferase4e-2098.6
NC_007354:569321:591138591138591926789Ehrlichia canis str. Jake, complete genomeRibosomal RNA adenine dimethylase4e-30131
NC_007799:647514:651140651140651973834Ehrlichia chaffeensis str. Arkansas, complete genomedimethyladenosine transferase7e-32137
NC_006831:664000:681713681713682501789Ehrlichia ruminantium str. Gardel, complete genomeDimethyladenosine transferase2e-28126
NC_005295:689500:706239706239707027789Ehrlichia ruminantium str. Welgevonden, complete genomedimethyladenosine transferase2e-28126
NC_006832:668913:686085686085686873789Ehrlichia ruminantium str. Welgevonden, complete genomeDimethyladenosine transferase2e-28126
NC_002939:2008304:204054120405412041371831Geobacter sulfurreducens PCA, complete genomedimethyladenosine transferase2e-27123
NC_009483:2640403:267104426710442671871828Geobacter uraniireducens Rf4 chromosome, complete genomedimethyladenosine transferase3e-31135
NC_014297:1574238:159281915928191593652834Halalkalicoccus jeotgali B3 chromosome, complete genomedimethyladenosine transferase8e-25114
NC_008818:1644223:164953516495351650290756Hyperthermus butylicus DSM 5456, complete genomeDimethyladenosine transferase8e-1684.3
NC_009776:941964:944000944000944731732Ignicoccus hospitalis KIN4/I, complete genomedimethyladenosine transferase2e-25116
NC_009664:1195630:122434212243421225244903Kineococcus radiotolerans SRS30216, complete genomedimethyladenosine transferase3e-25115
NC_015638:877233:883579883579884391813Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeribosomal RNA small subunit methyltransferase A2e-27123
NC_008054:272801:293362293362294252891Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeDimethyladenosine transferase (16S rRNA dimethylase)3e-34145
NC_008529:264000:287832287832288722891Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDimethyladenosine transferase (rRNA methylation)3e-34145
NC_015435:1781492:179993317999331800586654Metallosphaera cuprina Ar-4 chromosome, complete genomedimethyladenosine transferase3e-0962.8
NC_015574:2355500:237285923728592373701843Methanobacterium sp. SWAN-1 chromosome, complete genomeRibosomal RNA small subunit methyltransferase A1e-1893.6
NC_014122:341365:355348355348356157810Methanocaldococcus infernus ME chromosome, complete genomedimethyladenosine transferase1e-22107
NC_009975:1565865:157082815708281571619792Methanococcus maripaludis C6, complete genomedimethyladenosine transferase3e-23108
NC_005791:961500:973423973423974226804Methanococcus maripaludis S2, complete genomedimethyladenosine transferase related protein (rRNA methylase)4e-22105
NC_009634:349204:364543364543365346804Methanococcus vannielii SB chromosome, complete genomedimethyladenosine transferase1e-20100
NC_018876:2628966:265188026518802652692813Methanolobus psychrophilus R15 chromosome, complete genomedimethyladenosine transferase3e-1892.4
NC_014507:1861541:187634318763431877116774Methanoplanus petrolearius DSM 11571 chromosome, complete genomedimethyladenosine transferase3e-25115
NC_015676:1361468:136146813614681362283816Methanosalsum zhilinae DSM 4017 chromosome, complete genomedimethyladenosine transferase2e-2099.4
NC_007633:988000:321432144014801Mycoplasma capricolum subsp. capricolum ATCC 27343, completedimethyladenosine transferase3e-25115
NC_010120:662969:663870663870664649780Neisseria meningitidis 053442, complete genomedimethyladenosine transferase5e-50197
NC_017501:1633436:164998316499831650762780Neisseria meningitidis 8013, complete genomedimethyladenosine transferase (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase; 16S rRNA dimethylase; high level kasugamycin resistan2e-50199
NC_013016:633313:633313633313634092780Neisseria meningitidis alpha14 chromosome, complete genomedimethyladenosine transferase9e-50197
NC_017505:721395:724479724479725258780Neisseria meningitidis alpha710 chromosome, complete genomeputative dimethyladenosine transferase2e-50199
NC_017514:1520245:153586915358691536648780Neisseria meningitidis M01-240149 chromosome, complete genomedimethyladenosine transferase2e-50199
NC_017517:749031:752120752120752899780Neisseria meningitidis M01-240355 chromosome, complete genomedimethyladenosine transferase8e-50197
NC_017515:1555500:156998215699821570761780Neisseria meningitidis M04-240196 chromosome, complete genomedimethyladenosine transferase1e-50199
NC_003112:719490:722579722579723358780Neisseria meningitidis MC58, complete genomedimethyladenosine transferase4e-50198
NC_017518:795113:798197798197798976780Neisseria meningitidis NZ-05/33 chromosome, complete genomedimethyladenosine transferase2e-50199
NC_017512:642229:642229642229643008780Neisseria meningitidis WUE 2594, complete genomedimethyladenosine transferase (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase; 16S rRNA dimethylase; high level kasugamycin resistan9e-50197
NC_003116:867943:871027871027871806780Neisseria meningitidis Z2491, complete genomedimethyladenosine transferase9e-50197
NC_015731:2148517:216526521652652166044780Nitrosomonas sp. Is79A3 chromosome, complete genomeRibosomal RNA small subunit methyltransferase A3e-58225
NC_004193:35698:504565045651340885Oceanobacillus iheyensis HTE831, complete genomedimethyladenosine transferase2e-34146
NC_010793:30488:334153341534236822Orientia tsutsugamushi str. Ikeda, complete genomedimethyladenosine transferase2e-31136
NC_010003:1746319:176212317621231762950828Petrotoga mobilis SJ95, complete genomedimethyladenosine transferase5e-25114
NC_010729:265791:267175267175267951777Porphyromonas gingivalis ATCC 33277, complete genomeputative dimethyladenosine transferase1e-22106
NC_015571:440605:441989441989442765777Porphyromonas gingivalis TDC60, complete genomedimethyladenosine transferase4e-22105
NC_002950:155873:157257157257158033777Porphyromonas gingivalis W83, complete genomedimethyladenosine transferase1e-22106
NC_014033:1808782:184754418475441848335792Prevotella ruminicola 23 chromosome, complete genomedimethyladenosine transferase1e-22107
NC_005071:671084:675068675068675910843Prochlorococcus marinus str. MIT 9313, complete genomeputative rRNA (adenine-N6,N6)-dimethyltransferase3e-2099.4
NC_008701:391216:390521390521391228708Pyrobaculum islandicum DSM 4184, complete genomedimethyladenosine transferase7e-22104
NC_015931:134601:151726151726152439714Pyrolobus fumarii 1A, complete genomeribosomal RNA adenine methylase transferase7e-1167.8
NC_016632:170000:213640213640214269630Serratia symbiotica str. 'Cinara cedri' chromosome, completedimethyladenosine transferase5e-52204
NC_015277:6213304:408240824894813Sphingobacterium sp. 21 chromosome, complete genomeRibosomal RNA small subunit methyltransferase A2e-25116
NC_012121:139741:145689145689146579891Staphylococcus carnosus subsp. carnosus TM300, complete genomeribosomal RNA adenine dimethylase3e-31135
NC_014205:17445:174451744518251807Staphylothermus hellenicus DSM 12710 chromosome, complete genomeribosomal RNA adenine methylase transferase2e-1996.7
NC_015875:1926981:192786119278611928733873Streptococcus pseudopneumoniae IS7493 chromosome, complete genome16S ribosomal RNA methyltransferase KsgA/Dim1 family protein2e-30132
NC_015760:2009425:201055620105562011428873Streptococcus salivarius CCHSS3, complete genomedimethyladenosine transferase9e-30130
NC_006177:3457637:346247034624703463327858Symbiobacterium thermophilum IAM 14863, complete genomedimethyladenosine transferase2e-32139
NC_007516:1086948:111134011113401112164825Synechococcus sp. CC9605, complete genomedimethyladenosine transferase6e-1891.3
NC_017052:96325:107471107471108325855Synechocystis sp. PCC 6803 substr. PCC-N, complete genomedimethyladenosine transferase2e-31136
NC_017039:96325:107471107471108325855Synechocystis sp. PCC 6803 substr. PCC-P, complete genomedimethyladenosine transferase2e-31136
NC_017277:96325:107471107471108325855Synechocystis sp. PCC 6803, complete genomedimethyladenosine transferase2e-31136
NC_000911:96325:107471107471108325855Synechocystis sp. PCC 6803, complete genomedimethyladenosine transferase2e-31136
NC_014831:65408:878708787088802933Thermaerobacter marianensis DSM 12885 chromosome, complete genomedimethyladenosine transferase3e-32139
NC_012804:816961:839386839386840222837Thermococcus gammatolerans EJ3, complete genomeRibosomal RNA adenine methylase transferase (Dimethyladenosine transferase) (ksgA)6e-22104
NC_013894:543901:563313563313564056744Thermocrinis albus DSM 14484 chromosome, complete genomedimethyladenosine transferase1e-1687.4
NC_008698:435885:444789444789445601813Thermofilum pendens Hrk 5, complete genomeribosomal RNA adenine methylase transferase4e-2098.6
NC_002578:1333827:134826013482601348979720Thermoplasma acidophilum DSM 1728, complete genomerRNA dimethyladenosine transferase4e-1065.5
NC_002689:309940:323459323459324172714Thermoplasma volcanium GSS1, complete genomerRNA dimethyladenosine transferase2e-0756.6
NC_011653:466007:469518469518470303786Thermosipho africanus TCF52B, complete genomedimethyladenosine transferase3e-21102
NC_016148:1175999:117718511771851178012828Thermovirga lienii DSM 17291 chromosome, complete genomedimethyladenosine transferase1e-23110
NC_017168:561402:580072580072580890819Yersinia pestis A1122 chromosome, complete genomeKsgA/Dim1 family 16S ribosomal RNA methyltransferase6e-67254
NC_010159:770172:788835788835789653819Yersinia pestis Angola, complete genomedimethyladenosine transferase6e-67254
NC_008150:4601202:460120246012024602020819Yersinia pestis Antiqua, complete genomedimethyladenosine transferase6e-67254
NC_017265:3861259:386044838604483861266819Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,dimethyladenosine transferase6e-67254
NC_005810:4183297:420196742019674202785819Yersinia pestis biovar Microtus str. 91001, complete genomedimethyladenosine transferase6e-67254
NC_017160:520799:520799520799521617819Yersinia pestis D182038 chromosome, complete genomedimethyladenosine transferase6e-67254
NC_004088:4073698:409482040948204095638819Yersinia pestis KIM, complete genomedimethyladenosine transferase6e-67254
NC_008149:442168:442168442168442986819Yersinia pestis Nepal516, complete genomedimethyladenosine transferase6e-67254
NC_009381:3558018:357668835766883577506819Yersinia pestis Pestoides F chromosome, complete genomedimethyladenosine transferase6e-67254
NC_014029:576459:576459576459577277819Yersinia pestis Z176003 chromosome, complete genomedimethyladenosine transferase6e-67254
NC_009708:3862044:388318538831853884003819Yersinia pseudotuberculosis IP 31758 chromosome, complete genomedimethyladenosine transferase6e-67254
NC_010634:732016:731205731205732023819Yersinia pseudotuberculosis PB1/+, complete genomedimethyladenosine transferase6e-67254
NC_010465:3919572:393826139382613939079819Yersinia pseudotuberculosis YPIII, complete genomedimethyladenosine transferase6e-67254