Pre_GI: BLASTN Hits

Some Help

Query: NC_003923:2794686 Staphylococcus aureus subsp. aureus MW2, complete genome

Start: 2794686, End: 2818052, Length: 23367

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a community-acquired methicillin-resistant (MSRA) strain and is one of the major pathogens causing community-acquired infections in the Midwestern USA. Several fatal infections were attributed to this strain in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002953:27730002773000279475321754Staphylococcus aureus subsp. aureus MSSA476, complete genome019330BLASTN svgBLASTP svg
NC_004461:24576824576826809922332Staphylococcus epidermidis ATCC 12228, complete genome4e-76293BLASTN svgBLASTP svg
NC_020164:23293402329340234976120422Staphylococcus warneri SG1, complete genome5e-57230BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome2e-50208BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome2e-50208BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome3e-49204BLASTN svgBLASTP svg
NC_002745:84084884084886459823751Staphylococcus aureus subsp. aureus N315, complete genome7e-44186BLASTN svgBLASTP svg
NC_002952:88450088450090389519396Staphylococcus aureus subsp. aureus MRSA252, complete genome7e-44186BLASTN svgBLASTP svg
NC_014335:32885003288500330729218793Bacillus cereus biovar anthracis str. CI chromosome, complete1e-20109BLASTN svgBLASTP svg
CP002207:113466634666Bacillus atrophaeus 1942, complete genome3e-18101BLASTN svgBLASTP svg
NC_020207:18720001872000190209930100Enterococcus faecium NRRL B-2354, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_016011:28757472875747290001324267Listeria ivanovii subsp. ivanovii PAM 55, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021171:2697398*2697398271566018263Bacillus sp. 1NLA3E, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014614:2359046*2359046238727828233Clostridium sticklandii, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete3e-1281.8BLASTN svgBLASTP svg
UCMB5137:1*13837038370Bacillus atrophaeus UCMB-51375e-1177.8BLASTN svgBLASTP svg
NC_004668:3184319*3184319321199927681Enterococcus faecalis V583, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014829:72200072200074017718178Bacillus cellulosilyticus DSM 2522 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003210:2879906*2879906290440224497Listeria monocytogenes EGD-e, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013791:1082951*1082951110442521475Bacillus pseudofirmus OF4 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7e-1073.8BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome7e-1073.8BLASTN svgBLASTP svg
UCMB5137:18349991834999185304118043Bacillus atrophaeus UCMB-51377e-1073.8BLASTN svgBLASTP svg
NC_012914:33675033675036344026691Paenibacillus sp. JDR-2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007576:1854136*1854136187957225437Lactobacillus sakei subsp. sakei 23K, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002162:41797417976332721531Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007168:2631535*2631535265430622772Staphylococcus haemolyticus JCSC1435, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015978:1266196*1266196129576529570Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_021171:16619231661923168490422982Bacillus sp. 1NLA3E, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003909:46147894614789463323118443Bacillus cereus ATCC 10987, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003997:15229371522937154942926493Bacillus anthracis str. Ames, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004722:4767294*4767294479042223129Bacillus cereus ATCC 14579, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005945:15230141523014154950626493Bacillus anthracis str. Sterne, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005957:15492011549201157570226502Bacillus thuringiensis serovar konkukian str. 97-27, complete4e-0867.9BLASTN svgBLASTP svg
NC_006274:15478191547819157118123363Bacillus cereus E33L, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007530:15230601523060154955226493Bacillus anthracis str. 'Ames Ancestor', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014335:4566692*4566692458509918408Bacillus cereus biovar anthracis str. CI chromosome, complete4e-0867.9BLASTN svgBLASTP svg
CP002207:18945001894500191721322714Bacillus atrophaeus 1942, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019949:631561*63156164987518315Mycoplasma cynos C142 complete genome3e-0661.9BLASTN svgBLASTP svg