Pre_GI: BLASTN Hits

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Query: NC_003911:2042389 Silicibacter pomeroyi DSS-3, complete genome

Start: 2042389, End: 2065712, Length: 23324

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009952:1680682*1680682171856437883Dinoroseobacter shibae DFL 12, complete genome2e-112414BLASTN svgBLASTP svg
NC_008686:1180388*1180388120659926212Paracoccus denitrificans PD1222 chromosome 1, complete sequence7e-78299BLASTN svgBLASTP svg
NC_020908:14729811472981149914226162Octadecabacter arcticus 238, complete genome7e-47196BLASTN svgBLASTP svg
NC_007802:1991211*1991211202618734977Jannaschia sp. CCS1, complete genome2e-38168BLASTN svgBLASTP svg
NC_007493:1929000*1929000195414225143Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence9e-31143BLASTN svgBLASTP svg
NC_010524:2117347*2117347214204224696Leptothrix cholodnii SP-6, complete genome1e-20109BLASTN svgBLASTP svg
NC_008752:35110063511006353392522920Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013165:2440883*2440883246471323831Slackia heliotrinireducens DSM 20476, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014217:4597426*4597426462121223787Starkeya novella DSM 506 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011894:2811573*2811573283498323411Methylobacterium nodulans ORS 2060, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007493:207932*20793223466126730Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_014034:2899120*2899120292265123532Rhodobacter capsulatus SB1003 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013956:595320*59532063373038411Pantoea ananatis LMG 20103 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010725:750911*75091177963428724Methylobacterium populi BJ001, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015703:3842144*3842144386963427491Runella slithyformis DSM 19594 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007948:3541987*3541987356359921613Polaromonas sp. JS666, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007759:21462542146254216719420941Syntrophus aciditrophicus SB, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007643:791500*79150081271221213Rhodospirillum rubrum ATCC 11170, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010424:14657*146574330928653Candidatus Desulforudis audaxviator MP104C, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014532:11087511087513531724443Halomonas elongata DSM 2581, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008358:1623278*1623278164165618379Hyphomonas neptunium ATCC 15444, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008789:1837493*1837493185616418672Halorhodospira halophila SL1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010552:23314862331486235409922614Burkholderia ambifaria MC40-6 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010694:436500*43650046233725838Erwinia tasmaniensis, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011420:1178762*1178762119759918838Rhodospirillum centenum SW, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014006:3124818*3124818317034545528Sphingobium japonicum UT26S chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008577:2115440*2115440215134235903Shewanella sp. ANA-3 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg