Pre_GI: BLASTP Hits

Some Help

Query: NC_003911:1265972:1275144 Silicibacter pomeroyi DSS-3, complete genome

Start: 1275144, End: 1275398, Length: 255

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:2217877:223175222317522232006255Dinoroseobacter shibae DFL 12, complete genomehypothetical protein2e-38157
NC_008687:965152:972058972058972303246Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelix-turn-helix domain protein1e-1375.5
NC_007925:3933765:394934239493423949620279Rhodopseudomonas palustris BisB18, complete genometranscriptional regulator, XRE family1e-1168.9
NC_020063:1051310:105768110576811057920240Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcription factor, MBF1 like protein1e-1065.5
NC_016845:4498097:451513345151334515378246Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Xre family transcriptional regulator2e-1064.7
NC_004547:1062410:107453210745321074786255Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein9e-1062.4
NC_012962:4942000:494348549434854944096612Photorhabdus asymbiotica, complete genomehypothetical protein7e-1062.4
NC_004547:1062410:107419910741991074447249Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative regulatory protein1e-0962
NC_012962:4942000:494316649431664943414249Photorhabdus asymbiotica, complete genomehypothetical protein2e-0961.6
NC_014500:3097362:314029631402963140550255Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein3e-0960.5
NC_005773:5310339:531147853114785311723246Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDNA-binding protein6e-0959.7
NC_005126:3204980:320953832095383209798261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0858.5
NC_014500:3097362:314063831406383140886249Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein3e-0857.4
NC_014323:4665610:467335646733564673646291Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-0856.2
NC_013446:2130021:213635421363542136662309Comamonas testosteroni CNB-2, complete genomeputative regulatory protein8e-0855.8
NC_013131:8480384:850444485044448504677234Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family1e-0755.1
NC_002678:763808:780697780697780948252Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-0754.7
NC_007626:697926:712256712256712492237Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator3e-0753.9
NC_014034:1330843:134702813470281347285258Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator4e-0753.1
NC_009076:3564500:360646236064623606719258Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family1e-0651.6
NC_009428:807577:825669825669825926258Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeXRE family transcriptional regulator2e-0650.8
NC_015554:1653614:166147716614771661734258Alteromonas sp. SN2 chromosome, complete genomeXRE family transcriptional regulator4e-0650.4
NC_007951:570500:579985579985580206222Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, XRE family5e-0650.1