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Query: NC_003888:7706226:7726124 Streptomyces coelicolor A3(2), complete genome

Start: 7726124, End: 7726489, Length: 366

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013169:513327:515796515796516287492Kytococcus sedentarius DSM 20547, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit6e-1476.3
NC_013595:7302888:731991573199157320244330Streptosporangium roseum DSM 43021, complete genomeMultisubunit Na+/H+ antiporter MnhG subunit- like protein2e-1374.3
NC_019903:134169:146396146396146788393Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,multisubunit sodium/proton antiporter subunit MrpG4e-1270.1
NC_006322:3198829:320422132042213204595375Bacillus licheniformis ATCC 14580, complete genomeMrpG1e-1168.6
NC_004193:3215500:323231832323183232782465Oceanobacillus iheyensis HTE831, complete genomeNa(+):H(+) antiporter1e-1065.5
NC_018645:247917:260623260623260943321Desulfobacula toluolica Tol2, complete genomeNa(+)/H(+) antiporter subunit G7e-0959.3
NC_012883:1695703:171936717193671719780414Thermococcus sibiricus MM 739, complete genomeMembrane-bound NADP+-reducing complex MBX, subunit MbxC (Na+/H+ transporter subunit)1e-0858.5
NC_008345:3287000:329163432916343291933300Shewanella frigidimarina NCIMB 400, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit3e-0857.4
NC_000961:1303446:130372713037271304089363Pyrococcus horikoshii OT3, complete genomehypothetical protein6e-0856.2
NC_014225:1403007:141377014137701414093324Waddlia chondrophila WSU 86-1044 chromosome, complete genomemultiple resistance and pH homeostasis system, subunit G2e-0754.7
NC_002971:1523065:152970515297051530085381Coxiella burnetii RSA 493, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit2e-0754.7
NC_019942:987134:103664810366481037001354Aciduliprofundum sp. MAR08-339, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit4e-0753.5
NC_016642:2573481:258694525869452587307363Pseudovibrio sp. FO-BEG1 chromosome, complete genomeNa+/H+ antiporter subunit6e-0752.8
NC_011059:65414:982969829698640345Prosthecochloris aestuarii DSM 271, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit7e-0752.8
NC_014538:1975385:197636519763651976682318Thermoanaerobacter sp. X513 chromosome, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit9e-0752.4
NC_009831:4447919:446512644651264465467342Shewanella sediminis HAW-EB3, complete genomeMultisubunit Na+/H+ antiporter MnhG subunit-like protein9e-0752.4
NC_016614:1178000:120371812037181204014297Vibrio sp. EJY3 chromosome 2, complete sequenceputative monovalent cation/H+ antiporter subunit G1e-0652
NC_000868:643548:661931661931662326396Pyrococcus abyssi GE5, complete genomehypothetical protein1e-0651.6
NC_014655:3345204:335742133574213357786366Leadbetterella byssophila DSM 17132 chromosome, complete genomemultisubunit sodium/proton antiporter, mrpg subunit2e-0651.2
NC_014010:484000:494517494517494918402Candidatus Puniceispirillum marinum IMCC1322 chromosome, completemonovalent cation/proton antiporter, MnhG/PhaG subunit3e-0650.8
NC_012982:1282856:128919812891981289602405Hirschia baltica ATCC 49814, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit6e-0649.7
NC_019977:1621939:164732716473271647692366Methanomethylovorans hollandica DSM 15978, complete genomemonovalent cation/proton antiporter, MnhG/PhaG subunit9e-0648.9