Pre_GI: BLASTP Hits

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Query: NC_003888:5790104:5794528 Streptomyces coelicolor A3(2), complete genome

Start: 5794528, End: 5795022, Length: 495

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:2681331:268259926825992683072474Streptomyces sp. SirexAA-E chromosome, complete genomeAsnC family transcriptional regulator7e-29126
NC_013169:1058463:107853310785331079030498Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, AsnC family6e-25113
NC_011886:1176238:118064211806421181145504Arthrobacter chlorophenolicus A6, complete genometranscriptional regulator, AsnC family6e-1993.6
NC_016947:1455744:147807014780701478570501Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAsnC family transcriptional regulator1e-1892
NC_008541:1042322:104410010441001044603504Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, AsnC family3e-1890.9
NC_018581:3646489:365296236529623653498537Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator5e-1890.5
NC_018581:3646489:365956636595663660057492Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator1e-1375.9
NC_015164:1812439:182745818274581827925468Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AsnC family3e-1271.2
NC_009512:469000:474365474365474826462Pseudomonas putida F1, complete genomeputative transcriptional regulator, AsnC family5e-1270.5
NC_013222:2595315:261182026118202612299480Robiginitalea biformata HTCC2501, complete genomeprobable transcriptional regulator1e-1168.9
NC_015733:443122:448987448987449448462Pseudomonas putida S16 chromosome, complete genomeAsnC family transcriptional regulator1e-1168.9
NC_015311:1101761:112163111216311122140510Prevotella denticola F0289 chromosome, complete genomeAsnC family transcriptional regulator9e-1166.2
NC_015379:6226661:625428962542896254750462Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcriptional regulator, Fis family4e-1063.9
NC_013037:6209424:621759962175996218069471Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AsnC family9e-1062.8
NC_009255:1890112:189450218945021894966465Burkholderia vietnamiensis G4 chromosome 2, complete sequenceAsnC family transcriptional regulator1e-0962.4
NC_015160:231276:233935233935234405471Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, AsnC family2e-0961.6
NC_014623:3503218:350442935044293504896468Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeAsnC family transcriptional regulator3e-0960.8
NC_015757:831285:839618839618840088471Sulfobacillus acidophilus TPY chromosome, complete genometranscriptional regulator, AsnC family7e-0960.1
NC_016884:2701217:271093827109382711408471Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeAsnC family transcriptional regulator7e-0960.1
NC_013510:1295439:130216213021621302617456Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AsnC family7e-0960.1
NC_013926:614206:633121633121633582462Aciduliprofundum boonei T469 chromosome, complete genometranscriptional regulator, AsnC family2e-0858.5
NC_015312:6357469:636686863668686367428561Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeAsnC family transcriptional regulator3e-0858.2
NC_015186:2165628:216562821656282166074447Acidiphilium multivorum AIU301, complete genomeAsnC family transcriptional regulator6e-0857
NC_007948:4558000:456894545689454569439495Polaromonas sp. JS666, complete genometranscriptional regulator, AsnC family9e-0856.2
NC_008711:3454359:345838334583833458802420Arthrobacter aurescens TC1, complete genometranscriptional regulator, AsnC family1e-0755.5
NC_013947:1011899:101189910118991012345447Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-0755.5
NC_010482:1540011:154001115400111540508498Candidatus Korarchaeum cryptofilum OPF8, complete genometranscriptional regulator, AsnC family2e-0755.1
NC_015474:1432065:145348714534871454026540Pyrococcus sp. NA2 chromosome, complete genomeputative protein AsnC family transcriptional regulator3e-0754.7
NC_018531:3625810:362977736297773630241465Arthrobacter sp. Rue61a chromosome, complete genomeAsnC family transcriptional regulator2e-0754.7
NC_009512:755658:782286782286782723438Pseudomonas putida F1, complete genomeputative transcriptional regulator, AsnC family3e-0754.3
NC_015733:2720183:272636127263612726723363Pseudomonas putida S16 chromosome, complete genomeAsnC family transcriptional regulator4e-0753.9
NC_013769:123958:127351127351127812462Sulfolobus islandicus L.D.8.5 chromosome, complete genomeregulatory protein, AsnC/Lrp family5e-0753.5
NC_012726:115500:139123139123139584462Sulfolobus islandicus M.16.4 chromosome, complete genomeAsnC family transcriptional regulator5e-0753.5
NC_013745:371322:391051391051391512462Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completetranscriptional regulator, AsnC family7e-0753.1
NC_007974:1007834:102216010221601022630471Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AsnC family1e-0652.4
NC_008463:3394000:341394834139483414421474Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative glutamate uptake regulatory protein1e-0652.4
NC_011770:3626000:364557236455723646045474Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator2e-0652
NC_020388:693479:726135726135726587453Natronomonas moolapensis 8.8.11 complete genomeLrp/AsnC family transcription regulator2e-0652
NC_015376:3320818:335632633563263356808483Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AsnC family protein2e-0651.6
NC_014151:449732:454575454575455027453Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, AsnC family2e-0651.6
NC_020064:1409596:141391714139171414354438Serratia marcescens FGI94, complete genometranscriptional regulator4e-0650.4
NC_015379:5002595:500845950084595008890432Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, MarR family5e-0650.4
NC_008541:3579442:359949435994943599958465Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, AsnC family5e-0650.4
NC_017271:2789667:281053928105392810970432Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator AsnC-lrp family1e-0549.3