Pre_GI: BLASTP Hits

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Query: NC_003888:5790104:5791641 Streptomyces coelicolor A3(2), complete genome

Start: 5791641, End: 5793524, Length: 1884

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011881:89705:1031991031991048661668Arthrobacter chlorophenolicus A6 plasmid pACHL02, completemonooxygenase FAD-binding4e-60233
NC_010162:9311465:9313154931315493149621809Sorangium cellulosum 'So ce 56', complete genomePheA/TfdB family FAD-binding monooxygenase1e-41171
NC_008726:4725389:4727334472733447291271794Mycobacterium vanbaalenii PYR-1, complete genomemonooxygenase, FAD-binding3e-41170
NC_015957:5082172:5097645509764550995101866Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase3e-40167
NC_007337:10464:1768817688194841797Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding2e-39164
NC_010804:831000:8498428498428516291788Burkholderia multivorans ATCC 17616 chromosome 1, completeputative 2,4-dichlorophenol hydroxylase4e-37156
NC_011666:1572487:1582885158288515846811797Methylocella silvestris BL2, complete genomemonooxygenase FAD-binding6e-37156
NC_020911:3076791:3099027309902731007991773Octadecabacter antarcticus 307, complete genomeputative 3-[3-hydroxy-phenyl]propionate/3-hydroxycinnamic acid hydroxylase7e-37155
NC_016078:3130573:3130573313057331323121740Pelagibacterium halotolerans B2 chromosome, complete genomeputative dichlorophenol monooxygenase/hydroxylase2e-36154
NC_007337:10464:2676526765285251761Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding9e-36152
NC_007953:1043957:1042333104233310439641632Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative flavoprotein monooxygenase1e-35151
NC_009921:3473854:3512387351238735142221836Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding2e-35150
NC_017249:263873:2660002660002676101611Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-32141
NC_020453:1785473:1788214178821417898151602Agromonas oligotrophica S58 DNA, complete genomemonooxygenase, FAD-binding8e-31135
NC_010162:10962500:1097856010978560109800681509Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-28128
NC_013929:3953046:3958597395859739600961500Streptomyces scabiei 87.22 chromosome, complete genomemonooxygenase7e-28125
NC_015761:1488807:1500144150014415016521509Salmonella bongori NCTC 12419, complete genomeoxygenase3e-27123
NC_013440:4235489:4250039425003942515501512Haliangium ochraceum DSM 14365, complete genomemonooxygenase FAD-binding protein5e-27123
NC_009380:2310000:2327514232751423289741461Salinispora tropica CNB-440 chromosome, complete genomeFAD-binding monooxygenase3e-26120
NC_015957:196000:2153312153312169651635Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase4e-26120
NC_015381:1705383:1723640172364017253011662Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-26120
NC_011894:6888562:6889870688987068914261557Methylobacterium nodulans ORS 2060, complete genomemonooxygenase FAD-binding4e-26120
NC_013510:170199:1711941711941726751482Thermomonospora curvata DSM 43183, complete genomemonooxygenase FAD-binding protein6e-25116
NC_013406:3650300:3660192366019236617541563Paenibacillus sp. Y412MC10 chromosome, complete genomemonooxygenase FAD-binding protein9e-25115
NC_011149:1578451:1591287159128715927951509Salmonella enterica subsp. enterica serovar Agona str. SL483,monooxygenase, FAD-binding1e-24115
NC_013093:2230171:2232011223201122334381428Actinosynnema mirum DSM 43827, complete genomemonooxygenase FAD-binding5e-24113
NC_011094:1584038:1590088159008815915961509Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-24113
NC_003197:1611302:1622640162264016241481509Salmonella typhimurium LT2, complete genomehypothetical protein4e-24113
NC_016810:1576636:1579493157949315810011509Salmonella enterica subsp. enterica serovar Typhimurium strputative monooxygenase4e-24113
NC_016856:1621279:1632617163261716341251509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-24113
NC_016860:1614280:1620330162033016218381509Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-24113
NC_016863:1575488:1580808158080815823161509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-24113
NC_016857:1576636:1579493157949315810281536Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-24113
NC_017046:1574057:1579377157937715809121536Salmonella enterica subsp. enterica serovar Typhimurium str. 798monooxygenase3e-24113
NC_013595:5176000:5192010519201051935571548Streptosporangium roseum DSM 43021, complete genomehypothetical protein8e-24112
NC_016935:4367000:4396165439616543976611497Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein6e-24112
NC_010511:7024412:7027749702774970292841536Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding monooxygenase1e-22108
NC_009921:4903688:4915169491516949166081440Frankia sp. EAN1pec, complete genomePentachlorophenol monooxygenase2e-22107
NC_015690:4643869:4659078465907846605741497Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein6e-22106
NC_016111:6175975:6182314618231461836121299Streptomyces cattleya NRRL 8057, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase6e-22106
NC_013172:466300:4873254873254888571533Brachybacterium faecium DSM 4810, complete genome2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase1e-20102
NC_016590:1183470:1184291118429111859041614Burkholderia sp. YI23 chromosome 3, complete sequencemonooxygenase FAD-binding protein1e-20101
NC_008278:2813362:2816780281678028183601581Frankia alni ACN14a, complete genomeputative polyketide oxygenase/hydroxylase2e-20101
NC_003155:921494:9237789237789253701593Streptomyces avermitilis MA-4680, complete genomemonooxygenase4e-20100
NC_006513:1949751:1964804196480419664831680Azoarcus sp. EbN1, complete genomehypothetical protein4e-20100
NC_013209:2248119:2272920227292022739871068Acetobacter pasteurianus IFO 3283-01, complete genomemonooxygenase FAD-binding2e-20100
NC_017111:2248096:2272897227289722739641068Acetobacter pasteurianus IFO 3283-32, complete genomemonooxygenase FAD-binding2e-20100
NC_016114:7282882:7285076728507672866591584Streptomyces flavogriseus ATCC 33331 chromosome, complete genomemonooxygenase FAD-binding protein1e-1998.6
NC_013131:7437831:7453032745303274546451614Catenulispora acidiphila DSM 44928, complete genomemonooxygenase FAD-binding2e-1997.8
NC_014318:1320170:1326723132672313281411419Amycolatopsis mediterranei U32 chromosome, complete genomeFAD-dependent oxidoreductase2e-1997.8
NC_017186:1320186:1326739132673913281571419Amycolatopsis mediterranei S699 chromosome, complete genomeFAD-dependent oxidoreductase2e-1997.8
NC_008543:2871747:2894682289468228963941713Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemonooxygenase, FAD-binding2e-1997.8
NC_008061:2368517:2370588237058823723001713Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemonooxygenase, FAD-binding2e-1997.8
NC_013037:2851940:2873882287388228755251644Dyadobacter fermentans DSM 18053, complete genomemonooxygenase FAD-binding2e-1997.8
NC_008711:3701635:3711492371149237129431452Arthrobacter aurescens TC1, complete genomeFAD-binding monooxygenase, PheA/TfdB family3e-1997.4
NC_010338:588000:5895335895335910711539Caulobacter sp. K31, complete genomemonooxygenase FAD-binding3e-1997.4
NC_019673:3607958:3614658361465836161211464Saccharothrix espanaensis DSM 44229 complete genomeMonooxygenase, FAD-binding protein3e-1997.1
NC_018691:1322389:1324592132459213261931602Alcanivorax dieselolei B5 chromosome, complete genomeMonooxygenase, FAD-binding protein4e-1997.1
NC_010515:1375091:1379117137911713808141698Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemonooxygenase FAD-binding5e-1996.7
NC_014013:112008:1276641276641288811218Sphingobium japonicum UT26S chromosome 2, complete genomeputative monooxygenase5e-1996.7
NC_016047:1234743:1235981123598112375491569Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFAD-dependent monooxygenase6e-1996.3
NC_007777:2459357:2477263247726324787981536Frankia sp. CcI3, complete genomemonooxygenase, FAD-binding6e-1996.3
NC_015677:3339181:3339826333982633415681743Ramlibacter tataouinensis TTB310 chromosome, complete genomePentachlorophenol 4-monooxygenase1e-1895.5
NC_007384:307013:3242203242203258841665Shigella sonnei Ss046, complete genome3-(3-hydroxyphenyl)propionate hydroxylase1e-1895.1
NC_008705:4053070:4074891407489140766121722Mycobacterium sp. KMS, complete genomemonooxygenase, FAD-binding3e-1894
NC_008146:4019711:4040409404040940421301722Mycobacterium sp. MCS, complete genomemonooxygenase, FAD-binding protein3e-1894
NC_011001:63986:8490284902866141713Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative flavoprotein monooxygenase6e-1892.8
NC_016935:1636278:1731742173174217333641623Paenibacillus mucilaginosus 3016 chromosome, complete genomemonooxygenase FAD-binding protein8e-1892.4
NC_015690:1109335:1166438116643811680601623Paenibacillus mucilaginosus KNP414 chromosome, complete genomemonooxygenase FAD-binding protein8e-1892.4
NC_010473:1384000:1387278138727813889421665Escherichia coli str. K-12 substr. DH10B, complete genome3-(3-hydroxyphenyl)propionate hydroxylase9e-1892.4
NC_014210:2277971:2279008227900822807921785Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,monooxygenase FAD-binding protein4e-1790.5
NC_007333:1411050:1425799142579914272141416Thermobifida fusca YX, complete genomeputative rifampin monooxygenase1e-1689
NC_015953:46732:7931479314809271614Streptomyces sp. SirexAA-E chromosome, complete genomemonooxygenase FAD-binding protein9e-1789
NC_013929:1670402:1672755167275516744431689Streptomyces scabiei 87.22 chromosome, complete genome3-(3-hydroxyphenyl)propionate hydroxylase1e-1688.6
NC_010557:207846:2094962094962110911596Burkholderia ambifaria MC40-6 chromosome 3, complete sequencemonooxygenase FAD-binding2e-1688.2
NC_007333:1411050:1419335141933514207951461Thermobifida fusca YX, complete genomehypothetical protein2e-1687.8
NC_008595:2546696:2551419255141925524831065Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding4e-1687
NC_010505:1581429:1581429158142915831591731Methylobacterium radiotolerans JCM 2831, complete genomemonooxygenase FAD-binding4e-1687
NC_008391:1210451:1231979123197912335411563Burkholderia cepacia AMMD chromosome 2, complete sequencemonooxygenase, FAD-binding5e-1686.7
NC_016582:93754:1090711090711105881518Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative oxygenase6e-1686.3
NC_009142:3943829:3948118394811839506402523Saccharopolyspora erythraea NRRL 2338, complete genomeputative polyketide oxygenase/hydroxylase6e-1686.3
NC_010172:3413392:3413392341339234148731482Methylobacterium extorquens PA1, complete genomemonooxygenase FAD-binding7e-1686.3
NC_010524:4788753:4810441481044148121771737Leptothrix cholodnii SP-6, complete genomemonooxygenase FAD-binding1e-1585.5
NC_013947:613774:6314386314386329041467Stackebrandtia nassauensis DSM 44728 chromosome, complete genomemonooxygenase FAD-binding protein2e-1584.7
NC_014623:1829000:1835557183555718370081452Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-ring hydroxylase2e-1584.7
NC_010511:7553703:7568955756895575708591905Methylobacterium sp. 4-46 chromosome, complete genomephenol 2-monooxygenase3e-1584.3
NC_012982:2772976:2791800279180027932781479Hirschia baltica ATCC 49814, complete genomemonooxygenase FAD-binding3e-1584.3
NC_004193:375416:6671986671986686881491Oceanobacillus iheyensis HTE831, complete genomepentachlorophenol-4-monooxygenase4e-1583.6
NC_007951:1928906:1928906192890619306181713Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative 3-(3-hydroxy- phenyl)propionate hydroxylase (MhpA)1e-1482
NC_014168:1724993:1726011172601117276091599Segniliparus rotundus DSM 44985 chromosome, complete genomemonooxygenase FAD-binding protein4e-1377
NC_011894:901630:9036739036739055771905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation5e-1376.6
NC_011894:3319856:3336800333680033387041905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation6e-1376.3
NC_014643:892138:9002229002229017001479Rothia dentocariosa ATCC 17931 chromosome, complete genomepentachlorophenol monooxygenase9e-1375.9
NC_015381:1623587:1667332166733216689151584Burkholderia gladioli BSR3 chromosome 1, complete sequencemonooxygenase FAD-binding protein1e-1275.5
NC_008595:1792318:1798825179882518002521428Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding2e-1275.1
NC_009511:1746631:1745057174505717466341578Sphingomonas wittichii RW1 chromosome, complete genomeFAD-binding monooxygenase3e-1274.3
NC_009921:3384116:3407259340725934089531695Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding7e-1272.8
NC_012917:3241196:3280889328088932823221434Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemonooxygenase FAD-binding1e-1172
NC_014010:2689682:2709389270938927114192031Candidatus Puniceispirillum marinum IMCC1322 chromosome, completephenol 2-monooxygenase1e-0862
NC_009921:3551036:3593125359312535943511227Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding1e-0862
NC_010939:1986263:2020259202025920214251167Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinolhydroxylase2e-0861.2
NC_010278:1918000:1942943194294319441091167Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase5e-0756.6
NC_008309:1289370:1306116130611613072821167Haemophilus somnus 129PT, complete genomepossible 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase6e-0756.6
NC_010519:1802294:1820460182046018216261167Haemophilus somnus 2336 chromosome, complete genomeUbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase6e-0756.2