Pre_GI: BLASTP Hits

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Query: NC_003888:5114147:5147937 Streptomyces coelicolor A3(2), complete genome

Start: 5147937, End: 5148449, Length: 513

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:5987000:600631560063156006836522Streptomyces avermitilis MA-4680, complete genomeribosomal protein S95e-72270
NC_013929:4136742:414039141403914140918528Streptomyces scabiei 87.22 chromosome, complete genome30S ribosomal protein S97e-70262
NC_018750:4728870:475549747554974756009513Streptomyces venezuelae ATCC 10712, complete genomeSSU ribosomal protein S9p5e-66249
NC_015953:4385419:442588544258854426412528Streptomyces sp. SirexAA-E chromosome, complete genome30S ribosomal protein S94e-64243
NC_016109:3525588:352813135281313528637507Kitasatospora setae KM-6054, complete genome30S ribosomal protein S96e-50196
NC_014218:1485568:148556814855681486053486Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal protein S98e-41166
NC_015145:2942500:295390829539082954411504Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome30S ribosomal protein S9P2e-39161
NC_011886:2950411:296486429648642965370507Arthrobacter chlorophenolicus A6, complete genomeribosomal protein S94e-39160
NC_012803:1839809:183980918398091840297489Micrococcus luteus NCTC 2665, complete genomeSSU ribosomal protein S9P4e-37154
NC_008541:3282415:328842332884233288929507Arthrobacter sp. FB24 chromosome 1, complete sequenceribosomal protein S93e-37154
NC_013174:650986:657718657718658209492Jonesia denitrificans DSM 20603, complete genomeribosomal protein S92e-36151
NC_014165:597000:652042652042652563522Thermobispora bispora DSM 43833 chromosome, complete genome30S ribosomal protein S98e-31132
NC_013721:276717:279610279610280098489Gardnerella vaginalis 409-05, complete genomeribosomal protein S92e-27121
NC_014666:7641060:764286776428677643274408Frankia sp. EuI1c chromosome, complete genomeribosomal protein S94e-27120
NC_012490:2067246:208755920875592088071513Rhodococcus erythropolis PR4, complete genome30S ribosomal protein S92e-26118
NC_014220:2239594:224143022414302241822393Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeribosomal protein S96e-2096.7
NC_020164:701151:725900725900726292393Staphylococcus warneri SG1, complete genome30S ribosomal protein S92e-1994.7
NC_020134:301500:309379309379309771393Clostridium stercorarium subsp. stercorarium DSM 8532, complete30S ribosomal protein S94e-1994
NC_003366:2731995:273199527319952732387393Clostridium perfringens str. 13, complete genome30S ribosomal protein S95e-1993.6
NC_020995:3300751:331538533153853315777393Enterococcus casseliflavus EC20, complete genome30S ribosomal protein S95e-1993.6
NC_014727:368698:374060374060374455396Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,30S ribosomal protein s98e-1993.2
NC_012470:258287:264405264405264797393Streptococcus equi subsp. zooepidemicus, complete genome30S ribosomal protein S91e-1892
NC_002951:2288674:228867422886742289072399Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein S92e-1891.7
NC_007622:2239799:223979922397992240197399Staphylococcus aureus RF122, complete genome30S ribosomal protein S92e-1891.7
NC_003923:2301234:230123423012342301632399Staphylococcus aureus subsp. aureus MW2, complete genome30S ribosomal protein S92e-1891.7
NC_010079:2352691:235269123526912353089399Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein S92e-1891.7
NC_007795:2299327:229932722993272299725399Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein S9, putative2e-1891.7
NC_017341:2384736:238473623847362385134399Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,30S ribosomal protein S92e-1891.7
NC_017342:1012555:103759410375941037992399Staphylococcus aureus subsp. aureus TCH60 chromosome, complete30S ribosomal protein S92e-1891.7
NC_007577:1517000:152407115240711524481411Prochlorococcus marinus str. MIT 9312, complete genome30S ribosomal protein S92e-1891.7
NC_009697:3659834:366370936637093664101393Clostridium botulinum A str. ATCC 19397 chromosome, complete30S ribosomal protein S93e-1891.3
NC_009698:3553365:356081835608183561210393Clostridium botulinum A str. Hall chromosome, complete genome30S ribosomal protein S93e-1891.3
NC_017297:3787191:378911337891133789505393Clostridium botulinum F str. 230613 chromosome, complete genome30S ribosomal protein S93e-1891.3
NC_002745:2289829:228982922898292290221393Staphylococcus aureus subsp. aureus N315, complete genome30S ribosomal protein S92e-1891.3
NC_002758:2359329:235932923593292359721393Staphylococcus aureus subsp. aureus Mu50, complete genome30S ribosomal protein S92e-1891.3
NC_016912:2170615:217061521706152171007393Staphylococcus aureus subsp. aureus VC40 chromosome, complete30S ribosomal protein S92e-1891.3
NC_017343:2212780:221278022127802213172393Staphylococcus aureus subsp. aureus ECT-R 2, complete genome30S ribosomal protein S9 (BS10)2e-1891.3
NC_017347:2350802:235080223508022351194393Staphylococcus aureus subsp. aureus T0131 chromosome, complete30S ribosomal protein S92e-1891.3
NC_017351:2335753:233575323357532336145393Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete30S ribosomal protein S92e-1891.3
NC_015555:327562:371960371960372352393Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeribosomal protein S94e-1890.9
NC_007350:692041:717211717211717603393Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,30S ribosomal protein S94e-1890.5
NC_008816:1476209:148378714837871484197411Prochlorococcus marinus str. AS9601, complete genome30S ribosomal protein S94e-1890.5
NC_009089:117980:122268122268122660393Clostridium difficile 630, complete genome30S ribosomal protein S97e-1889.7
NC_013316:120759:126015126015126407393Clostridium difficile R20291, complete genome30S ribosomal protein S97e-1889.7
NC_007929:1463295:147790614779061478298393Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSSU ribosomal protein S9P7e-1889.7
NC_009840:1485383:155430115543011554711411Prochlorococcus marinus str. MIT 9215, complete genome30S ribosomal protein S91e-1789.4
NC_004193:119737:160222160222160614393Oceanobacillus iheyensis HTE831, complete genome30S ribosomal protein S91e-1789
NC_008817:1476473:151441915144191514829411Prochlorococcus marinus str. MIT 9515, complete genome30S ribosomal protein S91e-1789
NC_014501:5471984:548035654803565480769414Cyanothece sp. PCC 7822 chromosome, complete genome30S ribosomal protein S92e-1788.2
NC_014209:1910109:192514319251431925535393Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein S92e-1788.2
NC_013921:1977444:199247219924721992864393Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein S92e-1788.2
NC_019771:4459000:448008244800824480498417Anabaena cylindrica PCC 7122, complete genomeSSU ribosomal protein S9P3e-1787.8
NC_009091:1423677:145744114574411457851411Prochlorococcus marinus str. MIT 9301, complete genome30S ribosomal protein S93e-1787.8
NC_010718:237962:239329239329239727399Natranaerobius thermophilus JW/NM-WN-LF, complete genomeSSU ribosomal protein S9P5e-1787
NC_014006:611592:616378616378616905528Sphingobium japonicum UT26S chromosome 1, complete genomeribosomal protein S95e-1787
NC_012560:1260031:126953612695361269928393Azotobacter vinelandii DJ, complete genome30S ribosomal protein S96e-1786.7
NC_021150:1258780:126954812695481269940393Azotobacter vinelandii CA6, complete genome30S ribosomal protein S96e-1786.7
NC_014964:388458:433147433147433539393Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete30S ribosomal protein S91e-1685.9
NC_014538:1975385:199052319905231990915393Thermoanaerobacter sp. X513 chromosome, complete genome30S ribosomal protein S91e-1685.9
NC_010320:918532:923669923669924061393Thermoanaerobacter sp. X514 chromosome, complete genome30S ribosomal protein S91e-1685.9
NC_010321:429720:437731437731438123393Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete30S ribosomal protein S91e-1685.9
NC_014328:4387303:442673244267324427124393Clostridium ljungdahlii ATCC 49587 chromosome, complete genome30S ribosomal protein S91e-1685.9
NC_008011:663958:689297689297689689393Lawsonia intracellularis PHE/MN1-00, complete genomeribosomal protein S92e-1685.5
NC_008820:2027977:204900920490092049416408Prochlorococcus marinus str. MIT 9303, complete genome30S ribosomal protein S92e-1685.5
NC_009012:2100000:210358021035802103972393Clostridium thermocellum ATCC 27405, complete genomeribosomal protein S93e-1684.7
NC_003911:1791878:179813317981331798615483Silicibacter pomeroyi DSS-3, complete genome30S ribosomal protein S92e-1684.7
NC_011726:213956:217795217795218202408Cyanothece sp. PCC 8801, complete genomeribosomal protein S93e-1684.3
NC_015580:3834244:385693438569343857449516Novosphingobium sp. PP1Y, complete genome30S ribosomal protein S93e-1684.3
NC_013161:212941:216780216780217187408Cyanothece sp. PCC 8802, complete genomeribosomal protein S94e-1684
NC_015958:2251619:227565222756522276044393Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome30S ribosomal protein S94e-1684
NC_019970:336472:403276403276403668393Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein S96e-1683.6
NC_014410:403776:448156448156448548393Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein S96e-1683.6
NC_009883:1262000:126219012621901262684495Rickettsia bellii OSU 85-389, complete genome30S ribosomal protein S95e-1683.6
NC_007940:266000:266485266485266979495Rickettsia bellii RML369-C, complete genome30S ribosomal protein S95e-1683.6
NC_008687:133728:140856140856141335480Paracoccus denitrificans PD1222 chromosome 2, complete sequenceribosomal protein S91e-1582.4
NC_009434:1156834:117195411719541172346393Pseudomonas stutzeri A1501, complete genome30S ribosomal protein S91e-1582.4
NC_010556:141374:143536143536143928393Exiguobacterium sibiricum 255-15, complete genomeribosomal protein S91e-1582.4
NC_013771:1171251:119153611915361191946411Cyanobacterium UCYN-A, complete genomeSSU ribosomal protein S9P1e-1582.4
NC_018665:139646:143476143476143868393Exiguobacterium antarcticum B7 chromosome, complete genome30S ribosomal protein S91e-1582
NC_015519:197836:232533232533232922390Tepidanaerobacter sp. Re1 chromosome, complete genome30S ribosomal protein S92e-1582
NC_005070:1978000:197848419784841978885402Synechococcus sp. WH 8102, complete genome30S ribosomal protein S92e-1581.6
NC_007516:347824:362773362773363174402Synechococcus sp. CC9605, complete genome30S ribosomal protein S92e-1581.6
NC_015740:1017000:103146710314671031859393Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete30S ribosomal protein S92e-1581.6
NC_014377:112992:146417146417146806390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeSSU ribosomal protein S9P2e-1581.6
NC_004557:2711702:272817127281712728563393Clostridium tetani E88, complete genome30S ribosomal protein S92e-1581.6
NC_014171:109280:146488146488146880393Bacillus thuringiensis BMB171 chromosome, complete genome30S ribosomal protein S92e-1581.6
NC_017208:108134:148536148536148928393Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete30S ribosomal protein S92e-1581.6
NC_005072:1458799:147288514728851473295411Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete30S ribosomal protein S92e-1581.3
NC_010723:223935:271329271329271721393Clostridium botulinum E3 str. Alaska E43, complete genomeribosomal protein S93e-1581.3
NC_013716:4824541:484556448455644845956393Citrobacter rodentium ICC168, complete genome30S ribosomal subunit protein S94e-1580.9
NC_015737:664999:681046681046681441396Clostridium sp. SY8519, complete genome30S ribosomal protein S95e-1580.5
NC_015391:2523451:252887025288702529262393Carnobacterium sp. 17-4 chromosome, complete genome30S ribosomal protein S96e-1580.1
NC_016048:751000:752822752822753226405Oscillibacter valericigenes Sjm18-20, complete genome30S ribosomal protein S96e-1580.1
NC_018697:2055725:206058920605892060981393Cycloclasticus sp. P1 chromosome, complete genomeribosomal protein S96e-1580.1
NC_010546:4144449:416534141653414165754414Cyanothece sp. ATCC 51142 chromosome circular, complete sequence30S ribosomal protein S97e-1579.7
NC_012673:1540000:155689015568901557282393Exiguobacterium sp. AT1b, complete genomeribosomal protein S92e-1479
NC_016584:233486:253905253905254300396Desulfosporosinus orientis DSM 765 chromosome, complete genome30S ribosomal protein S91e-1479
NC_015311:813989:833430833430833816387Prevotella denticola F0289 chromosome, complete genome30S ribosomal protein S91e-1479
NC_004432:80780:967899678997181393Mycoplasma penetrans HF-2, complete genomeribosomal protein S92e-1478.2
NC_009785:387910:390952390952391344393Streptococcus gordonii str. Challis substr. CH1, complete genomeribosomal protein S93e-1477.8
NC_015722:852000:853004853004853444441Candidatus Midichloria mitochondrii IricVA chromosome, complete30S ribosomal protein S93e-1477.8
NC_016026:997225:102750510275051027993489Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeribosomal S9/S16 family protein3e-1477.8
NC_007645:6013242:602347860234786023870393Hahella chejuensis KCTC 2396, complete genomeRibosomal protein S96e-1476.6
NC_015672:2071141:208761420876142088003390Flexistipes sinusarabici DSM 4947 chromosome, complete genome30S ribosomal protein S92e-1374.7
NC_018644:1263891:128525212852521285641390Alpha proteobacterium HIMB59 chromosome, complete genomeRibosomal protein S9/S161e-1272.4
NC_016146:360455:384623384623384997375Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR30S ribosomal protein S92e-1271.6
NC_014150:1123570:114288111428811143279399Brachyspira murdochii DSM 12563 chromosome, complete genomeribosomal protein S93e-1271.2
NC_016621:224700:225147225147225521375Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu chromosome,30S ribosomal protein S94e-1270.9
NC_016001:224213:233132233132233518387Flavobacterium branchiophilum, complete genome30S ribosomal protein S95e-1270.5
NC_011565:385454:394274394274394660387Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,30S ribosomal protein S96e-1270.1
NC_004545:392685:410946410946411338393Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosomal protein S97e-1269.7
NC_013454:229587:232161232161232571411Blattabacterium sp. (Blattella germanica) str. Bge, complete30S ribosomal protein S92e-1168.2
NC_006908:291539:295628295628296020393Mycoplasma mobile 163K, complete genome30S ribosomal protein S93e-1167.8
NC_013123:78786:100608100608100997390Candidatus Sulcia muelleri SMDSEM, complete genomeribosomal protein S94e-1167.4
NC_012225:2474042:247705924770592477457399Brachyspira hyodysenteriae WA1, complete genome30S ribosomal protein S94e-1167.4
NC_014499:87528:106186106186106575390Candidatus Sulcia muelleri CARI chromosome, complete genome30S ribosomal protein S98e-1166.2
NC_018604:2377549:238592023859202386318399Brachyspira pilosicoli WesB complete genome30S ribosomal protein S91e-1066.2
NC_019908:2285819:229904022990402299438399Brachyspira pilosicoli P43/6/78 chromosome, complete genome30S ribosomal protein S91e-1066.2
NC_011901:2914000:292865629286562929048393Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete30S ribosomal protein S93e-1064.7
NC_012440:373863:387751387751388179429Persephonella marina EX-H1, complete genomeribosomal protein S97e-0960.1
NC_020195:234392:236932236932237342411Blattabacterium sp. (Blatta orientalis) str. Tarazona, completesmall subunit ribosomal protein S92e-0858.2
NC_013440:5509790:552911655291165529511396Haliangium ochraceum DSM 14365, complete genomeribosomal protein S92e-0755.1
NC_007086:557789:579396579396579788393Xanthomonas campestris pv. campestris str. 8004, complete genome30S ribosomal protein S95e-0753.9
NC_003902:555699:577313577313577705393Xanthomonas campestris pv. campestris str. ATCC 33913, complete30S ribosomal protein S95e-0753.9
NC_014004:66631:838028380284200399Candidatus Sulcia muelleri DMIN chromosome, complete genomeSSU ribosomal protein S9P6e-0753.5
NC_015315:1584890:159733315973331597782450Thermoproteus uzoniensis 768-20 chromosome, complete genome30S ribosomal protein S9P7e-0753.1
NC_005823:905500:926298926298926717420Leptospira interrogans serovar Copenhageni str. Fiocruz L1-13030S ribosomal protein S92e-0652
NC_004342:3370310:337031033703103370729420Leptospira interrogans serovar Lai str. 56601 chromosome I,ribosomal protein S92e-0652
NC_013894:464907:469797469797470237441Thermocrinis albus DSM 14484 chromosome, complete genomeribosomal protein S92e-0651.6
NC_016070:1448488:146094214609421461448507Thermoproteus tenax Kra 1, complete genome30S ribosomal protein S9p3e-0651.2