Pre_GI: BLASTP Hits

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Query: NC_003888:5042283:5043865 Streptomyces coelicolor A3(2), complete genome

Start: 5043865, End: 5045910, Length: 2046

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:4592000:4596559459655945986372079Streptomyces avermitilis MA-4680, complete genomesporulation-related protein01010
NC_015434:2375439:2375813237581323777381926Verrucosispora maris AB-18-032 chromosome, complete genomeTraB protein5e-50199
NC_014210:5270643:5286630528663052886812052Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein4e-29130
NC_014924:1701952:1701952170195217043002349Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomecell division protein FtsK/SpoIIIE2e-0965.1
NC_015953:5444572:5469863546986354727002838Streptomyces sp. SirexAA-E chromosome, complete genomecell division protein FtsK/SpoIIIE2e-0965.1
NC_014335:4414052:4418543441854344225714029Bacillus cereus biovar anthracis str. CI chromosome, completeFtsK/SpoIIIE family cell division protein3e-0964.3
NC_005945:4473790:4485133448513344890683936Bacillus anthracis str. Sterne, complete genomeFtsK/SpoIIIE family protein3e-0964.3
NC_011773:4541306:4548074454807445519283855Bacillus cereus AH820 chromosome, complete genomeftsk/spoiiie family protein3e-0964.3
NC_012581:4478036:4485968448596844899303963Bacillus anthracis str. CDC 684 chromosome, complete genomeFtsK/SpoIIIE family protein3e-0964.3
NC_012659:4474000:4484471448447144884063936Bacillus anthracis str. A0248, complete genomeFtsK/SpoIIIE family protein3e-0963.9
NC_007530:4474000:4484571448457144885063936Bacillus anthracis str. 'Ames Ancestor', complete genomeftsk/spoiiie family protein3e-0963.9
NC_003997:4473973:4484444448444444883793936Bacillus anthracis str. Ames, complete genomeFtsK/SpoIIIE family protein3e-0963.9
NC_005957:4472800:4479565447956544835814017Bacillus thuringiensis serovar konkukian str. 97-27, completecell division protein3e-0963.9
NC_010184:4497473:4508273450827345124544182Bacillus weihenstephanensis KBAB4, complete genomecell divisionFtsK/SpoIIIE4e-0963.9
NC_009715:873280:8898238898238919042082Campylobacter curvus 525.92 chromosome, complete genomeFtsK/SpoIIIE family protein6e-0963.2
NC_009802:931129:9336249336249356932070Campylobacter concisus 13826, complete genomeputative ftsk/spoiiie family9e-0962.8
NC_017200:4484399:4494175449417544961932019Bacillus thuringiensis serovar finitimus YBT-020 chromosome,cell division protein1e-0862.4
NC_014721:1028841:1030362103036210326022241Caldicellulosiruptor kristjanssonii 177R1B chromosome, completecell division protein ftsk/spoiiie2e-0861.6
NC_014652:1758787:1776880177688017791652286Caldicellulosiruptor hydrothermalis 108 chromosome, completecell division protein ftsk/spoiiie2e-0861.6
NC_011725:4636521:4647202464720246512814080Bacillus cereus B4264 chromosome, complete genomeDNA translocase FtsK2e-0861.2
NC_011969:4396000:4406980440698044110084029Bacillus cereus Q1 chromosome, complete genomecell division protein2e-0861.2
NC_004722:4614442:4622837462283746270034167Bacillus cereus ATCC 14579, complete genomeCell division protein ftsK3e-0860.8
NC_011772:4606000:4613096461309646171664071Bacillus cereus G9842, complete genomeftsk/spoiiie family protein3e-0860.8
NC_017208:4662500:4668261466826146722233963Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecell division protein ftsK7e-0859.7
NC_009953:1364500:1364983136498313663501368Salinispora arenicola CNS-205 chromosome, complete genomecell division protein FtsK8e-0859.7
NC_016025:596670:6203726203726231672796Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA segregation ATPase FtsK/SpoIIIE-like protein3e-0757.4
NC_014915:2900209:2922187292218729245412355Geobacillus sp. Y412MC52 chromosome, complete genomecell division protein FtsK/SpoIIIE7e-0756.6
NC_012796:2683711:2684543268454326869812439Desulfovibrio magneticus RS-1, complete genomeDNA translocase2e-0655.1
NC_006361:714944:7294887294887307891302Nocardia farcinica IFM 10152, complete genomehypothetical protein8e-0652.8