Pre_GI: BLASTP Hits

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Query: NC_003888:4613000:4626394 Streptomyces coelicolor A3(2), complete genome

Start: 4626394, End: 4627158, Length: 765

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:581143:584394584394585143750Streptomyces cattleya NRRL 8057, complete genomeHydrolase2e-70265
NC_009921:4903688:490709849070984907844747Frankia sp. EAN1pec, complete genomedienelactone hydrolase2e-24112
NC_008278:744777:758802758802759551750Frankia alni ACN14a, complete genomeputative Carboxymethylenebutenolidase3e-23108
NC_009482:2109270:211511521151152115891777Synechococcus sp. RCC307 chromosome, complete genomedienelactone hydrolase family protein7e-1270.9
NC_011740:2986514:300866730086673009593927Escherichia fergusonii ATCC 35469, complete genomeputative enzyme1e-1170.1
NC_012912:4428111:445124244512424452069828Dickeya zeae Ech1591, complete genomeCarboxymethylenebutenolidase4e-1065.5
NC_012721:2556160:2557534255753425587811248Burkholderia glumae BGR1 chromosome 2, complete genomeCarboxymethylenebutenolidase8e-1064.3
NC_010170:3944228:394422839442283944929702Bordetella petrii, complete genomecarboxymethylenebutenolidase2e-0963.2
NC_007759:512477:512477512477513358882Syntrophus aciditrophicus SB, complete genomedienelactone hydrolase family protein9e-0960.8
NC_009656:4079319:4097607409760740988481242Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-0858.2
NC_015186:1126830:112828311282831128954672Acidiphilium multivorum AIU301, complete genomeputative dienelactone hydrolase6e-0858.2
NC_004347:1038253:104078910407891041751963Shewanella oneidensis MR-1, complete genomedienelactone hydrolase family protein1e-0757
NC_005070:2308363:232411123241112324854744Synechococcus sp. WH 8102, complete genomedienelactone hydrolase family protein2e-0756.6
NC_011663:1159070:115907011590701160050981Shewanella baltica OS223 chromosome, complete genomedienelactone hydrolase2e-0756.2
NC_015726:2177783:219259521925952193290696Cupriavidus necator N-1 chromosome 1, complete sequencedienelactone hydrolase2e-0755.8
NC_013510:517878:536494536494537198705Thermomonospora curvata DSM 43183, complete genomeCarboxymethylenebutenolidase4e-0755.5
NC_008321:977500:981944981944982906963Shewanella sp. MR-4, complete genomeTwin-arginine translocation pathway signal4e-0755.5
NC_008322:3758500:376997637699763770938963Shewanella sp. MR-7, complete genomeTwin-arginine translocation pathway signal3e-0755.5
NC_013421:4714478:477210447721044772931828Pectobacterium wasabiae WPP163, complete genomeCarboxymethylenebutenolidase3e-0755.5
NC_009482:87193:882388823889020783Synechococcus sp. RCC307 chromosome, complete genomeputative carboxymethylenebutenolidase6e-0754.7
NC_020304:547036:557986557986558867882Desulfocapsa sulfexigens DSM 10523, complete genomedienelactone hydrolase-like enzyme7e-0754.3
NC_015137:1207769:1207769120776912089921224Burkholderia sp. CCGE1001 chromosome 2, complete sequencecarboxymethylenebutenolidase1e-0653.9
NC_007337:10464:208902089021594705Ralstonia eutropha JMP134 plasmid 1, complete sequenceCarboxymethylenebutenolidase1e-0653.9
NC_016114:7116141:712538371253837126108726Streptomyces flavogriseus ATCC 33331 chromosome, complete genomedienelactone hydrolase1e-0653.5
NC_011740:3739395:374411937441193744997879Escherichia fergusonii ATCC 35469, complete genomeputative hydrolase2e-0652.8
NC_014641:20103:211582115821874717Achromobacter xylosoxidans A8 plasmid pA81, complete sequencecarboxymethylenebutenolidase 53e-0652.4
NC_010170:3944228:396057939605793961295717Bordetella petrii, complete genomeprobable carboxymethylenebutenolidase3e-0652.4
NC_016147:1672482:168026216802621681044783Pseudoxanthomonas spadix BD-a59 chromosome, complete genomedienelactone hydrolase6e-0651.2
NC_017026:2286000:230644623064462307159714Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein9e-0650.8
NC_016804:2254979:227614222761422276855714Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein9e-0650.8
NC_009565:2306574:232773723277372328450714Mycobacterium tuberculosis F11, complete genomehypothetical protein9e-0650.8
NC_009380:4944183:495015349501534950923771Salinispora tropica CNB-440 chromosome, complete genomedienelactone hydrolase9e-0650.8