Pre_GI: BLASTP Hits

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Query: NC_003888:4613000:4613136 Streptomyces coelicolor A3(2), complete genome

Start: 4613136, End: 4614626, Length: 1491

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:4906639:4926336492633649277301395Streptomyces avermitilis MA-4680, complete genomeglycosyl transferase0697
NC_020133:902000:9184469184469198461401Mycobacterium liflandii 128FXT, complete genomemannosyltransferase3e-106385
NC_010612:957786:9747309747309761301401Mycobacterium marinum M, complete genomemannosyltransferase3e-105382
NC_004369:437594:4566284566284579021275Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-88325
NC_010175:1825878:1825878182587818271581281Chloroflexus aurantiacus J-10-fl, complete genomeglycosyl transferase group 11e-50201
NC_012032:1827244:1827244182724418285241281Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase group 11e-50201
NC_015177:1476073:1488570148857014904921923Pedobacter saltans DSM 12145 chromosome, complete genomeglycosyl transferase group 14e-42172
NC_011884:1591430:1591430159143015927911362Cyanothece sp. PCC 7425, complete genomeglycosyl transferase group 13e-37156
NC_014248:4642149:4643823464382346450941272Nostoc azollae 0708 chromosome, complete genomegroup 1 glycosyl transferase9e-29128
NC_009051:657000:6674556674556686361182Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 14e-1583.2
NC_000854:723000:7456957456957467861092Aeropyrum pernix K1, complete genomeglycosyl transferase, group 11e-1481.6
NC_015680:1562535:1595454159545415964881035Pyrococcus yayanosii CH1 chromosome, complete genomegroup 1 glycosyl transferase2e-1480.5
NC_003901:1346281:1346281134628113474861206Methanosarcina mazei Go1, complete genomeglycosyltransferase2e-1377.8
NC_003901:1346281:1351948135194813530871140Methanosarcina mazei Go1, complete genomeglycosyltransferase2e-1377.8
NC_008701:1363665:1362598136259813636831086Pyrobaculum islandicum DSM 4184, complete genomeglycosyl transferase, group 17e-1375.9
NC_013385:90331:9294392943940761134Ammonifex degensii KC4, complete genomeglycosyl transferase group 11e-1275.1
NC_013747:129394:1472721472721484321161Haloterrigena turkmenica DSM 5511 plasmid pHTUR04, completeglycosyl transferase group 12e-1274.7
NC_011761:1155636:1168849116884911700211173Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeglycoside hydrolase9e-1272
NC_002950:1748582:1768525176852517697871263Porphyromonas gingivalis W83, complete genomeglycosyl transferase, group 1 family protein1e-1171.6
NC_013501:1300182:1319387131938713205471161Rhodothermus marinus DSM 4252, complete genomeglycosyl transferase group 12e-1171.2
NC_007952:2812996:2823844282384428249351092Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative glycosyltransferase3e-1170.5
NC_009051:930758:9400869400869412461161Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 13e-1170.1
NC_009523:1025556:1051015105101510521271113Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase4e-1170.1
NC_013595:3361505:3382869338286933840471179Streptosporangium roseum DSM 43021, complete genomeglycosyltransferase7e-1168.9
NC_007955:742834:7522887522887534091122Methanococcoides burtonii DSM 6242, complete genomeglycosyl transferase, group 14e-1066.6
NC_008698:1612873:1656100165610016573801281Thermofilum pendens Hrk 5, complete genomeglycosyl transferase, group 17e-1065.9
NC_013517:3846747:3859697385969738609501254Sebaldella termitidis ATCC 33386, complete genomeglycosyl transferase group 18e-1065.5
NC_009523:5104413:5109217510921751114512235Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase1e-0965.1
NC_011653:1339868:1359463135946313608691407Thermosipho africanus TCF52B, complete genomesucrose-phosphate synthase2e-0964.3
NC_004668:2762464:2765849276584927670721224Enterococcus faecalis V583, complete genomeglycosyl transferase, group 1 family protein2e-0964.3
NC_005042:1719055:1741024174102417424181395Prochlorococcus marinus subsp. marinus str. CCMP1375, completeGlycosyltransferase3e-0963.9
NC_013198:813830:8342438342438354511209Lactobacillus rhamnosus GG, complete genomeglycosyl transferase, group 1 family protein4e-0963.5
NC_007796:2387002:2405171240517124062831113Methanospirillum hungatei JF-1, complete genomeglycosyl transferase, group 13e-0963.5
NC_015978:996933:1016396101639610176071212Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein3e-0963.5
NC_015416:2374000:2387494238749423887351242Methanosaeta concilii GP-6 chromosome, complete genomeglycosyl transferase, group 1 family protein3e-0963.5
NC_010676:61098:6305563055641461092Burkholderia phytofirmans PsJN chromosome 2, complete sequenceglycosyl transferase group 14e-0963.2
NC_013199:811929:8287778287778299851209Lactobacillus rhamnosus Lc 705, complete genomeglycosyl transferase, group 1 family protein4e-0963.2
NC_018012:121793:1426841426841440721389Thiocystis violascens DSM 198 chromosome, complete genomeglycosyltransferase5e-0962.8
NC_003364:225500:2421682421682432501083Pyrobaculum aerophilum str. IM2, complete genomeglycosyltransferase (type 1)1e-0862
NC_015315:1:1513215132163401209Thermoproteus uzoniensis 768-20 chromosome, complete genomefamily 1 glycosyl transferase9e-0962
NC_009051:1588060:1599790159979016009501161Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 13e-0860.5
NC_014836:223013:2317352317352329671233Desulfurispirillum indicum S5 chromosome, complete genomegroup 1 glycosyl transferase3e-0860.5
NC_016148:1877711:1886949188694918880251077Thermovirga lienii DSM 17291 chromosome, complete genomegroup 1 glycosyl transferase4e-0860.1
NC_010617:1428902:1428902142890214300951194Kocuria rhizophila DC2201, complete genomeputative glycosyltransferase4e-0860.1
NC_016613:221476:2578752578752590051131Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein4e-0860.1
NC_016938:1492486:1505579150557915068021224Melissococcus plutonius DAT561 chromosome 1, complete genomeglycosyltransferase LafA3e-0860.1
NC_009483:4434375:4439766443976644409261161Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase5e-0859.7
NC_013757:3753241:3774656377465637759061251Geodermatophilus obscurus DSM 43160, complete genomeglycosyl transferase group 15e-0859.7
NC_014039:708427:7213607213607225441185Propionibacterium acnes SK137 chromosome, complete genomeglycogen synthase7e-0859.3
NC_016511:678582:6946546946546958381185Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeglycogen synthase7e-0859.3
NC_016512:679688:6940396940396952231185Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeglycogen synthase7e-0859.3
NC_013665:2495234:2495234249523424964211188Methanocella paludicola SANAE, complete genomeputative glycosyltransferase6e-0859.3
NC_009051:657000:6721416721416732231083Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 16e-0859.3
NC_007614:261588:2730342730342741101077Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, group 18e-0858.9
NC_019967:29448:4827448274494581185Natrinema pellirubrum DSM 15624 plasmid pNATPE01, completeglycosyltransferase9e-0858.9
NC_014656:624561:6443806443806456301251Bifidobacterium longum subsp. longum BBMN68 chromosome, completerfag11e-0758.5
NC_011593:1622260:1639533163953316407831251Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycogen synthase1e-0758.2
NC_017219:1622050:1639323163932316405731251Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative glycosyltransferase1e-0758.2
NC_020272:599064:6219096219096230481140Bacillus amyloliquefaciens IT-45, complete genomegroup 1 glycosyl transferase1e-0758.2
NC_013158:1085937:1095930109593010970901161Halorhabdus utahensis DSM 12940, complete genomeglycosyl transferase group 11e-0758.2
NC_008593:980731:1001330100133010024211092Clostridium novyi NT, complete genomeglycosyl transferase, group 1 family protein, putative2e-0757.8
NC_008530:1551356:1572124157212415733051182Lactobacillus gasseri ATCC 33323, complete genomeGlycosyltransferase2e-0757.8
NC_015052:1094825:1097421109742110986711251Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase3e-0757
NC_014960:2858572:2881008288100828821621155Anaerolinea thermophila UNI-1, complete genomeputative glycosyltransferase3e-0757
NC_021172:169215:1828541828541840711218Hyphomicrobium denitrificans 1NES1, complete genomegroup 1 glycosyl transferase3e-0757
NC_017218:1042298:1058284105828410595341251Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomestarch synthase5e-0756.6
NC_015554:817500:8341868341868353491164Alteromonas sp. SN2 chromosome, complete genomegroup 1 glycosyl transferase6e-0756.2
NC_011959:1965158:1983329198332919845161188Thermomicrobium roseum DSM 5159, complete genomeglycosyl transferase6e-0756.2
NC_014106:419511:4362644362644374421179Lactobacillus crispatus ST1, complete genomeGlycosyl transferase, group 16e-0756.2
NC_004307:579729:6019336019336031831251Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase5e-0756.2
NC_003552:1397311:1412255141225514134181164Methanosarcina acetivorans C2A, complete genomehexosyltransferase8e-0755.5
NC_021177:2139838:2141755214175521430711317Streptomyces fulvissimus DSM 40593, complete genomeGlycosyl transferase9e-0755.5
NC_014828:1795781:1795781179578117969141134Ethanoligenens harbinense YUAN-3 chromosome, complete genomeglycosyl transferase group 11e-0655.5
NC_009659:2523874:2531647253164725327861140Janthinobacterium sp. Marseille chromosome, complete genomeglycosyltransferase1e-0655.5
NC_010581:937793:9422369422369434321197Beijerinckia indica subsp. indica ATCC 9039, complete genomeglycosyl transferase group 11e-0655.1
NC_017221:1222963:1246593124659312478431251Bifidobacterium longum subsp. longum KACC 91563 chromosome,glycosyltransferase1e-0655.1
NC_016051:1429800:1449925144992514510371113Thermococcus sp. AM4 chromosome, complete genomegalactosyltransferase1e-0655.1
NC_014169:1099024:1103419110341911046691251Bifidobacterium longum subsp. longum JDM301 chromosome, completeglycogen synthase2e-0654.7
NC_016631:3114000:3149900314990031510901191Granulicella mallensis MP5ACTX8 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.7
NC_009523:5475812:5495813549581354974201608Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.7
NC_018528:446610:4647484647484659111164Lactobacillus helveticus R0052 chromosome, complete genomeglycosyltransferase1e-0654.7
NC_017079:732834:7476547476547489161263Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative glycosyltransferase1e-0654.7
NC_008609:2643000:2662882266288226640391158Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, group 12e-0654.3
NC_012804:816961:8368448368448383551512Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 12e-0654.3
NC_012791:821371:8342308342308364762247Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase group 13e-0653.9
NC_010816:621849:6412026412026424521251Bifidobacterium longum DJO10A, complete genomeGlycosyltransferase3e-0653.9
NC_010080:445398:4590454590454602081164Lactobacillus helveticus DPC 4571, complete genomeputative glycosyltransferase2e-0653.9
NC_020541:3315068:3325648332564833268321185Rhodanobacter sp. 2APBS1, complete genomeglycosyltransferase2e-0653.9
NC_016631:4472987:4483061448306144842751215Granulicella mallensis MP5ACTX8 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.5
NC_009925:2728203:274663127466312747497867Acaryochloris marina MBIC11017, complete genomeglycosyl transferase, group 14e-0653.5
NC_016631:4472987:4486614448661444879061293Granulicella mallensis MP5ACTX8 chromosome, complete genomegroup 1 glycosyl transferase4e-0653.1
NC_003078:671000:6865666865666878161251Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative membrane-anchored glycosyltransferase protein5e-0653.1
NC_019940:1:1618316183174541272Thioflavicoccus mobilis 8321 chromosome, complete genomeglycosyltransferase6e-0652.8
NC_007512:1539095:1556775155677515579981224Pelodictyon luteolum DSM 273, complete genomeglycosyl transferase, group 1 family protein6e-0652.8
NC_017323:599549:6278196278196290691251Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencegroup 1 glycosyl transferase5e-0652.8
NC_014974:246404:2570712570712582311161Thermus scotoductus SA-01 chromosome, complete genomeglycosyltransferase8e-0652.4
NC_014165:2533040:2554212255421225553871176Thermobispora bispora DSM 43833 chromosome, complete genomegroup 1 glycosyl transferase8e-0652.4
NC_009523:4222696:4224735422473542259881254Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase8e-0652.4