Pre_GI: BLASTP Hits

Some Help

Query: NC_003888:4251867:4279519 Streptomyces coelicolor A3(2), complete genome

Start: 4279519, End: 4280136, Length: 618

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:5135285:514849551484955149112618Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-89326
NC_015953:3684065:369970236997023700319618Streptomyces sp. SirexAA-E chromosome, complete genomeGCN5-like N-acetyltransferase2e-87321
NC_016114:3655005:367650536765053677122618Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeN-acetyltransferase GCN54e-87320
NC_018750:3964784:398008039800803980697618Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-86318
NC_008578:2431074:243411724341172434809693Acidothermus cellulolyticus 11B, complete genomeGCN5-related N-acetyltransferase3e-60231
NC_017093:8757291:875982887598288760487660Actinoplanes missouriensis 431, complete genomehypothetical protein5e-58223
NC_002677:3253057:326097632609763261755780Mycobacterium leprae TN, complete genomehypothetical protein1e-28126
NC_011896:3252925:326084432608443261623780Mycobacterium leprae Br4923, complete genomehypothetical protein1e-28126
NC_015564:4727630:473201847320184732641624Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein6e-23107
NC_007164:2446879:245450724545072455442936Corynebacterium jeikeium K411, complete genomehypothetical protein1e-1273.2