Pre_GI: BLASTP Hits

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Query: NC_003366:1122654:1138271 Clostridium perfringens str. 13, complete genome

Start: 1138271, End: 1138783, Length: 513

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a type A isolate from the soil. It can establish gas gangrene in a murine experimental model. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008261:1332864:134914313491431349655513Clostridium perfringens ATCC 13124, complete genomeacetyltransferase, GNAT family7e-90328
NC_008262:1139500:115589911558991156411513Clostridium perfringens SM101, complete genomeacetyltransferase, GNAT family2e-87320
NC_015738:1768951:180021118002111800801591Eggerthella sp. YY7918, complete genomehypothetical protein2e-29128
NC_016077:702000:716278716278716796519Acidaminococcus intestini RyC-MR95 chromosome, complete genomeacetyltransferase5e-28123
NC_015428:2291430:230594123059412306474534Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeGCN5-like N-acetyltransferase3e-27121
NC_009615:3993187:401584240158424016351510Parabacteroides distasonis ATCC 8503 chromosome, complete genomeacetyltransferase9e-27119
NC_014150:1123570:114154411415441142035492Brachyspira murdochii DSM 12563 chromosome, complete genomeGCN5-related N-acetyltransferase8e-26116
NC_017045:1902582:190464819046481905145498Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,gcn5-related n-acetyltransferase9e-24109
NC_014738:1742654:174472017447201745217498Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,Gcn5-like N-acetyltransferase9e-24109
NC_006347:3805500:380564838056483806151504Bacteroides fragilis YCH46, complete genomeputative acetyltransferase1e-23108
NC_015164:3431279:345192034519203452507588Bacteroides salanitronis DSM 18170 chromosome, complete genomeputative acetyltransferase1e-23108
NC_015977:2565922:2579861257986125809221062Roseburia hominis A2-183 chromosome, complete genomeputative acetyltransferase2e-22105
NC_010610:1178430:119415811941581194715558Lactobacillus fermentum IFO 3956, complete genomeacetyltransferase8e-22102
NC_015978:113656:118390118390118914525Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein2e-2098.2
NC_021175:2063611:208381620838162084295480Streptococcus oligofermentans AS 1.3089, complete genomeacetyltransferase5e-2097.1
NC_014802:1631483:165079616507961651326531Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeacetyltransferase, GNAT family3e-1581.3
NC_009707:1811650:183093618309361831466531Campylobacter jejuni subsp. doylei 269.97 chromosome, completeacetyltransferase5e-1580.1
NC_017280:1584961:160569816056981606282585Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeGNAT family acetyltransferase1e-1479.3
NC_008787:1582110:160257216025721603102531Campylobacter jejuni subsp. jejuni 81-176, complete genomeacetyltransferase, GNAT family1e-1479.3
NC_003912:1742370:176381717638171764347531Campylobacter jejuni RM1221, complete genomeacetyltransferase, GNAT family1e-1479.3
NC_017281:1645903:166735016673501667880531Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomePutative acetyltransferase1e-1479.3
NC_017279:1603916:162420116242011624731531Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeGNAT family acetyltransferase2e-1478.6
NC_002163:1607360:162680716268071627337531Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative acetyltransferase2e-1478.6
NC_017214:1304774:132296313229631323544582Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeAcetyltransferase3e-1374.7
NC_017215:669358:687548687548688129582Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Acyltransferase transferring groups other than amino-acyl groups3e-1374.7
NC_012815:669436:687683687683688207525Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeHistone acetyltransferase3e-1374.7
NC_012814:669434:687681687681688205525Bifidobacterium animalis subsp. lactis Bl-04, complete genomeHistone acetyltransferase3e-1374.7
NC_011835:1395716:141396314139631414487525Bifidobacterium animalis subsp. lactis AD011 chromosome, completeacetyltransferase3e-1374.7
NC_017216:669296:687543687543688067525Bifidobacterium animalis subsp. lactis BLC1, complete genomeacetyltransferase, GNAT family3e-1374.7
NC_017217:669437:687684687684688208525Bifidobacterium animalis subsp. lactis V9 chromosome, completeHistone acetyltransferase3e-1374.7
NC_015738:1768951:1802540180254018040541515Eggerthella sp. YY7918, complete genomedrug/metabolite transporter superfamily permease1e-1066.2
NC_015496:1288377:131106913110691311569501Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeGCN5-related N-acetyltransferase1e-1065.9
NC_015738:1768951:1800810180081018024201611Eggerthella sp. YY7918, complete genomehypothetical protein2e-0961.6
NC_011146:1429836:144155914415591442092534Geobacter bemidjiensis Bem, complete genomeGCN5-related N-acetyltransferase5e-0960.5
NC_013510:5115500:512538251253825126071690Thermomonospora curvata DSM 43183, complete genomeGCN5-related N-acetyltransferase5e-0960.5
NC_011725:2949519:297080529708052971320516Bacillus cereus B4264 chromosome, complete genomeGNAT family acetyltransferase2e-0755.1