Pre_GI: BLASTP Hits

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Query: NC_003366:1122654:1124547 Clostridium perfringens str. 13, complete genome

Start: 1124547, End: 1125251, Length: 705

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a type A isolate from the soil. It can establish gas gangrene in a murine experimental model. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008261:1332864:133541113354111336115705Clostridium perfringens ATCC 13124, complete genomeputative glycerol uptake facilitator protein6e-130462
NC_008262:1139500:114202311420231142727705Clostridium perfringens SM101, complete genomeglycerol uptake facilitator protein6e-130462
NC_010723:2082750:208824720882472088957711Clostridium botulinum E3 str. Alaska E43, complete genomeglycerol uptake facilitator protein2e-87322
NC_010674:2185704:219338321933832194093711Clostridium botulinum B str. Eklund 17B, complete genomeglycerol uptake facilitator protein3e-81301
NC_015425:2528549:254242425424242543140717Clostridium botulinum BKT015925 chromosome, complete genomeglycerol uptake facilitator protein3e-72271
NC_008593:2281896:229212322921232292839717Clostridium novyi NT, complete genomeglycerol uptake facilitator protein2e-70265
NC_014632:11925:182161821618935720Ilyobacter polytropus DSM 2926 chromosome, complete genomeMIP family channel protein1e-69262
NC_010184:1017000:102324210232421024063822Bacillus weihenstephanensis KBAB4, complete genomeMIP family channel protein7e-68256
NC_014964:557910:563115563115563846732Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeMIP family channel protein3e-66251
NC_010321:562494:567699567699568430732Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeMIP family channel protein3e-66251
NC_008600:1042477:104916310491631049999837Bacillus thuringiensis str. Al Hakam, complete genomeglycerol uptake facilitator protein3e-66251
NC_008593:2281896:228751222875122288222711Clostridium novyi NT, complete genomeglycerol uptake facilitator protein3e-66251
NC_004722:1008500:101499910149991015835837Bacillus cereus ATCC 14579, complete genomeGlycerol uptake facilitator protein3e-66251
NC_011772:1011220:101675110167511017572822Bacillus cereus G9842, complete genomeglycerol uptake facilitator protein2e-66251
NC_011725:1032500:103906810390681039889822Bacillus cereus B4264 chromosome, complete genomeglycerol uptake facilitator protein2e-66251
NC_014171:1018338:102476510247651025586822Bacillus thuringiensis BMB171 chromosome, complete genomeglycerol uptake facilitator protein2e-66251
NC_017208:1050414:105779710577971058618822Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeglycerol uptake facilitator protein2e-66251
NC_016779:991298:995736995736996557822Bacillus cereus F837/76 chromosome, complete genomeGlycerol uptake facilitator protein2e-66251
NC_011773:1050000:105687710568771057698822Bacillus cereus AH820 chromosome, complete genomeglycerol uptake facilitator protein7e-66250
NC_011969:1084000:108950310895031090324822Bacillus cereus Q1 chromosome, complete genomeglycerol uptake facilitator protein6e-66250
NC_017200:1157835:116770711677071168528822Bacillus thuringiensis serovar finitimus YBT-020 chromosome,glycerol uptake facilitator protein6e-66250
NC_005957:1037205:104325310432531044089837Bacillus thuringiensis serovar konkukian str. 97-27, completeglycerol uptake facilitator protein8e-66249
NC_006274:1040836:104736110473611048197837Bacillus cereus E33L, complete genomeglycerol uptake facilitator protein8e-66249
NC_015425:2528549:253782625378262538536711Clostridium botulinum BKT015925 chromosome, complete genomeglycerol uptake facilitator protein1e-65249
NC_014632:1404000:141055514105551411274720Ilyobacter polytropus DSM 2926 chromosome, complete genomeMIP family channel protein3e-65248
NC_005945:1008000:101455210145521015388837Bacillus anthracis str. Sterne, complete genomeglycerol uptake facilitator protein2e-65248
NC_003997:1007139:101467410146741015495822Bacillus anthracis str. Ames, complete genomeglycerol uptake facilitator protein2e-65248
NC_007530:1007140:101467410146741015495822Bacillus anthracis str. 'Ames Ancestor', complete genomeglycerol uptake facilitator protein2e-65248
NC_012659:1008028:101457410145741015395822Bacillus anthracis str. A0248, complete genomeglycerol uptake facilitator protein2e-65248
NC_015391:1551959:155425615542561554972717Carnobacterium sp. 17-4 chromosome, complete genomeglycerol facilitator protein6e-65247
NC_014334:589526:608450608450609157708Lactobacillus casei str. Zhang chromosome, complete genomeglycerol uptake facilitator-like permease2e-64245
NC_014210:4377867:437958343795834380335753Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,MIP family channel protein8e-63239
NC_014638:321382:342518342518343249732Bifidobacterium bifidum PRL2010 chromosome, complete genomeglycerol uptake facilitator protein GlpF5e-61234
NC_013656:1345943:135670613567061357443738Lactococcus lactis subsp. lactis KF147, complete genomeglycerol uptake facilitator protein2e-59228
NC_014554:337268:337268337268337990723Lactobacillus plantarum subsp. plantarum ST-III chromosome,glycerol uptake facilitator protein4e-59228
NC_012488:1159463:117646011764601177164705Listeria monocytogenes Clip81459, complete genomeglycerol uptake facilitator protein4e-59227
NC_013766:1202713:121841212184121219116705Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-59227
NC_010336:1117325:112172011217201122484765Francisella philomiragia subsp. philomiragia ATCC 25017, completemajor intrinsic protein (MIP) family permease1e-58226
NC_016937:141984:146227146227146991765Francisella tularensis subsp. tularensis TI0902 chromosome,glycerol uptake facilitator protein3e-58224
NC_016933:141984:146227146227146991765Francisella tularensis TIGB03 chromosome, complete genomeGlycerol uptake facilitator protein3e-58224
NC_008245:141982:146225146225146989765Francisella tularensis subsp. tularensis FSC 198, complete genomeglycerol uptake facilitator protein3e-58224
NC_006570:141966:146209146209146973765Francisella tularensis subsp. tularensis Schu 4, complete genomeglycerol uptake facilitator protein3e-58224
NC_015696:610000:635450635450636214765Francisella sp. TX077308 chromosome, complete genomeglycerol uptake facilitator protein1e-57223
NC_010677:214712:218825218825219589765Francisella tularensis subsp. mediasiatica FSC147, complete genomeglycerol uptake facilitator protein7e-58223
NC_009257:226417:230660230660231424765Francisella tularensis subsp. tularensis WY96-3418 chromosome,major intrinsic protein family permease7e-58223
NC_007482:607365:618893618893619672780Pseudoalteromonas haloplanktis TAC125 chromosome II, completeputative glycerol diffusion channel1e-57222
NC_004193:2522000:253376925337692534599831Oceanobacillus iheyensis HTE831, complete genomeglycerol uptake facilitator2e-57222
NC_013171:312500:328016328016328735720Anaerococcus prevotii DSM 20548, complete genomeMIP family channel protein3e-56218
NC_017219:275476:294078294078294812735Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeglycerol uptake facilitator protein3e-55214
NC_008528:331260:341152341152341904753Oenococcus oeni PSU-1, complete genomeGlycerol uptake facilitator or related permease (Major Intrinsic Protein Family)2e-54212
NC_008497:1575884:158142215814221582129708Lactobacillus brevis ATCC 367, complete genomeGlycerol uptake facilitator related permease (Major Intrinsic Protein Family)7e-53207
NC_012803:2454380:245613324561332456855723Micrococcus luteus NCTC 2665, complete genomeMIP family channel protein1e-50199
NC_014643:892138:895613895613896581969Rothia dentocariosa ATCC 17931 chromosome, complete genomeMIP family glycerol uptake facilitator protein GlpF3e-49195
NC_007929:111092:129531129531130238708Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlycerol uptake facilitator protein1e-48192
NC_014554:1019730:102684210268421027558717Lactobacillus plantarum subsp. plantarum ST-III chromosome,glycerol uptake facilitator protein3e-44178
NC_012984:1074721:107871110787111079427717Lactobacillus plantarum JDM1, complete genomeglycerol uptake facilitator protein3e-44178
NC_004567:1066710:107231210723121073028717Lactobacillus plantarum WCFS1, complete genomeglycerol uptake facilitator protein3e-44178
NC_013656:2317224:235386423538642354733870Lactococcus lactis subsp. lactis KF147, complete genomeaquaporin/Glycerol uptake facilitator protein2e-43175
NC_017317:134671:147761147761148480720Corynebacterium ulcerans 809 chromosome, complete genomeglycerol uptake facilitator protein6e-40164
NC_018604:2350054:235483623548362355576741Brachyspira pilosicoli WesB complete genomeglycerol uptake facilitator protein1e-39163
NC_017243:3093393:310018731001873100951765Brachyspira intermedia PWS/A chromosome, complete genomeGlpF, Glycerol uptake facilitator-like permease1e-39162
NC_018607:2231975:223675622367562237496741Brachyspira pilosicoli B2904 chromosome, complete genomeglycerol uptake facilitator protein5e-39160
NC_014330:888366:893111893111893851741Brachyspira pilosicoli 95/1000 chromosome, complete genomeglycerol uptake facilitator protein6e-39160
NC_019908:2312194:232657923265792327319741Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycerol uptake facilitator protein8e-39160
NC_012225:2247796:225991622599162260656741Brachyspira hyodysenteriae WA1, complete genomeGlpF, Glycerol uptake facilitator-like permease6e-37154
NC_014751:302152:308526308526309299774Mycoplasma leachii PG50 chromosome, complete genometransporter, major intrinsic protein (MIP) family protein7e-35147
NC_007633:253143:260290260290261069780Mycoplasma capricolum subsp. capricolum ATCC 27343, completeglycerol uptake facilitator protein1e-34146
NC_010320:1949852:194985219498521950655804Thermoanaerobacter sp. X514 chromosome, complete genomeMIP family channel protein3e-31135
NC_014538:985339:100368910036891004492804Thermoanaerobacter sp. X513 chromosome, complete genomeMIP family channel protein3e-31135
NC_018720:311844:328600328600329370771Bifidobacterium asteroides PRL2011 chromosome, complete genometransporter, probably Glycerol facilitator4e-31134
NC_019978:2036779:204807020480702048870801Halobacteroides halobius DSM 5150, complete genomeMIP family channel protein1e-29129
NC_008750:450233:463631463631464458828Shewanella sp. W3-18-1, complete genomeMIP family channel protein2e-28126
NC_009438:212476:226071226071226898828Shewanella putrefaciens CN-32 chromosome, complete genomeMIP family channel protein2e-28126
NC_013421:163114:188377188377189216840Pectobacterium wasabiae WPP163, complete genomeMIP family channel protein4e-28124
NC_014633:442755:463810463810464628819Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceMIP family channel protein2e-27122
NC_016027:229180:244899244899245738840Gluconacetobacter xylinus NBRC 3288, complete genomemajor facilitator superfamily glycerol uptake transporter3e-25115
NC_012779:3652737:367431136743113675153843Edwardsiella ictaluri 93-146, complete genomeglycerol uptake facilitator protein7e-25114
NC_009648:3803622:384331538433153844118804Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative major Intrinsic protein channel, glycerol diffusion2e-24112
NC_016613:1877688:188544518854451886266822Vibrio sp. EJY3 chromosome 1, complete sequenceMIP family channel protein2e-24112
NC_014830:3156873:317083831708383171644807Intrasporangium calvum DSM 43043 chromosome, complete genomeMIP family channel protein7e-23107
NC_012691:2050957:206648620664862067328843Tolumonas auensis DSM 9187, complete genomeMIP family channel protein2e-22106
NC_014328:1286407:129113612911361291945810Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative major intrinsic protein, aquaporin2e-21102
NC_000916:31459:637296372964469741Methanothermobacter thermautotrophicus str. Delta H, completewater channel protein5e-1994.7
NC_011601:2139188:218297521829752183784810Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepropanediol diffusion facilitator2e-1789.4
NC_015737:1337605:134316113431611343859699Clostridium sp. SY8519, complete genomeglycerol uptake facilitator2e-1479.3
NC_014507:863210:864942864942865706765Methanoplanus petrolearius DSM 11571 chromosome, complete genomeMIP family channel protein2e-1376.3
NC_007712:3163000:318157231815723182471900Sodalis glossinidius str. 'morsitans', complete genomepropanediol diffusion facilitator1e-1170.1
NC_014640:4293430:429613742961374296850714Achromobacter xylosoxidans A8 chromosome, complete genomeporin5e-1168.2
NC_020453:1084238:113914811391481139900753Agromonas oligotrophica S58 DNA, complete genomeaquaporin Z5e-1168.2
NC_015711:8169752:820648082064808207316837Myxococcus fulvus HW-1 chromosome, complete genomeaquaporin Z5e-1167.8
NC_013740:1218429:127215312721531272812660Acidaminococcus fermentans DSM 20731, complete genomeMIP family channel protein8e-1167.4
NC_012588:432869:438983438983439852870Sulfolobus islandicus M.14.25 chromosome, complete genomemajor intrinsic protein1e-0963.5
NC_014306:1981956:198612919861291986824696Erwinia billingiae Eb661, complete genomeMIP family channel protein1e-0963.2
NC_015675:4526500:454533145453314546134804Mesorhizobium opportunistum WSM2075 chromosome, complete genomemajor intrinsic protein8e-0960.8
NC_008554:2469156:249074224907422491446705Syntrophobacter fumaroxidans MPOB, complete genomeMIP family channel proteins7e-0960.8
NC_011146:1429836:143829014382901438982693Geobacter bemidjiensis Bem, complete genomeMIP family channel protein7e-0960.8
NC_008095:6323456:634525463452546346090837Myxococcus xanthus DK 1622, complete genomeaquaporin Z1e-0860.5
NC_016776:5174606:521054552105455211237693Bacteroides fragilis 638R, complete genomeputative major intrinsic protein precursor1e-0860.1
NC_014933:814964:830266830266830946681Bacteroides helcogenes P 36-108 chromosome, complete genomeMIP family channel protein1e-0757
NC_008699:3775561:379506037950603796055996Nocardioides sp. JS614, complete genomeMIP family channel proteins2e-0756.2
NC_005085:3116514:312136831213683122057690Chromobacterium violaceum ATCC 12472, complete genomeaquaporin Z6e-0754.7
NC_014212:3206860:321056432105643211247684Meiothermus silvanus DSM 9946 chromosome, complete genomeMIP family channel protein1e-0653.9
NC_014839:170000:172483172483173178696Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceMIP family channel protein2e-0652.8
NC_010939:1633000:163331916333191634005687Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeaquaporin Z2e-0652.8
NC_016631:1329702:133754113375411338455915Granulicella mallensis MP5ACTX8 chromosome, complete genomemajor intrinsic protein3e-0652.4
NC_009802:114749:158640158640159350711Campylobacter concisus 13826, complete genomeNa+/H+ antiporter NhaC3e-0652
NC_015942:2060349:207160620716062072391786Acidithiobacillus ferrivorans SS3 chromosome, complete genomemajor intrinsic protein4e-0651.6
NC_004310:1923404:192512219251221925808687Brucella suis 1330 chromosome I, complete sequenceaquaporin Z4e-0651.6
NC_016797:1924248:192596619259661926652687Brucella suis VBI22 chromosome I, complete sequenceaquaporin Z4e-0651.6
NC_017251:1923391:192510919251091925795687Brucella suis 1330 chromosome I, complete genomeaquaporin Z4e-0651.6
NC_016778:1216739:123640112364011237087687Brucella canis HSK A52141 chromosome 1, complete sequenceaquaporin Z5e-0651.2
NC_010103:1920585:192329719232971923983687Brucella canis ATCC 23365 chromosome I, complete sequenceAquaporin Z5e-0651.2
NC_010278:1625695:162828916282891628975687Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,aquaporin Z, transmembrane water channel7e-0650.8
NC_009053:1668500:167111516711151671801687Actinobacillus pleuropneumoniae L20, complete genomeaquaporin Z7e-0650.8