Pre_GI: BLASTP Hits

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Query: NC_003305:1743939:1755946 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 1755946, End: 1756866, Length: 921

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Gram-negative soil bacterium. This is the most widely studied species in the genus. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003063:304962:317892317892318812921Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein9e-167585
NC_002678:6061448:607087660708766071766891Mesorhizobium loti MAFF303099, complete genomeputative glycosyl transferase2e-76286
NC_007651:1662558:167270616727061673629924Burkholderia thailandensis E264 chromosome I, complete sequenceputative glycosyl transferase3e-67255
NC_006350:3195165:320508132050813206004924Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative glycosyl transferase2e-66253
NC_007434:3452985:346395734639573464880924Burkholderia pseudomallei 1710b chromosome I, complete sequenceglycosyltransferase2e-66253
NC_006348:2071749:208018520801852081108924Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceglycosyl transferase, putative2e-66253
NC_009076:3045139:305505530550553055939885Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative glycosyl transferase5e-66251
NC_008836:2780339:279189627918962792780885Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative glycosyl transferase5e-66251
NC_009074:3029716:303963130396313040515885Burkholderia pseudomallei 668 chromosome I, complete sequenceputative glycosyl transferase5e-66251
NC_008785:914411:925968925968926852885Burkholderia mallei SAVP1 chromosome II, complete sequenceputative glycosyl transferase5e-66251
NC_009080:1815768:182544418254441826328885Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative glycosyl transferase5e-66251
NC_014098:850000:8606898606898626331945Bacillus tusciae DSM 2912 chromosome, complete genome6e-21101
NC_009076:3045139:3051434305143430532751842Burkholderia pseudomallei 1106a chromosome I, complete sequenceglycosyl transferase, group 2 family protein2e-1893.2
NC_006350:3195165:3201460320146032033011842Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative glycosyl transferase2e-1893.2
NC_007434:3452985:3460336346033634621771842Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative glycosyl transferase2e-1893.2
NC_009074:3029716:3036010303601030378511842Burkholderia pseudomallei 668 chromosome I, complete sequenceglycosyl transferase, group 2 family protein2e-1893.2
NC_008836:2780339:2794560279456027964011842Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative glycosyl transferase2e-1893.2
NC_009080:1815768:1821823182182318236641842Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative glycosyl transferase2e-1893.2
NC_006348:2071749:2076564207656420784051842Burkholderia mallei ATCC 23344 chromosome 1, complete sequence2e-1893.2
NC_008785:914411:9286029286029304731872Burkholderia mallei SAVP1 chromosome II, complete sequenceputative glycosyl transferase2e-1893.2
NC_009667:2860818:286961428696142870483870Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceglycosyltransferase-like protein4e-1789
NC_013665:231023:2453232453232481662844Methanocella paludicola SANAE, complete genomehypothetical protein5e-1788.6
NC_007651:1662558:1675409167540916772501842Burkholderia thailandensis E264 chromosome I, complete sequenceputative glycosyl transferase5e-1788.6
NC_018876:2305659:2332099233209923331511053Methanolobus psychrophilus R15 chromosome, complete genomeglycosyltransferase4e-1272.4
NC_007964:3036771:304551230455123046435924Nitrobacter hamburgensis X14, complete genomeglycosyltransferases-like1e-1170.9
NC_013665:1922000:1932534193253419335981065Methanocella paludicola SANAE, complete genomeputative glycosyltransferase7e-1065.1
NC_003552:2674385:2676934267693426779861053Methanosarcina acetivorans C2A, complete genomeglycosyltransferase7e-1064.7
NC_008639:2786447:281648328164832817355873Chlorobium phaeobacteroides DSM 266, complete genomeglycosyl transferase, family 21e-0860.8
NC_015677:896673:912910912910913611702Ramlibacter tataouinensis TTB310 chromosome, complete genomeb-glycosyltransferase3e-0859.7
NC_012883:1:390439044902999Thermococcus sibiricus MM 739, complete genomeprobable glycosyltransferase3e-0756.2
NC_012850:459315:475565475565476308744Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeglycosyl transferase family protein9e-0754.7
NC_013959:2892660:290234829023482903121774Sideroxydans lithotrophicus ES-1 chromosome, complete genomeglycosyl transferase family 22e-0653.5