Pre_GI: BLASTP Hits

Some Help

Query: NC_003304:2507000:2519121 Agrobacterium tumefaciens str. C58 chromosome circular, complete

Start: 2519121, End: 2520071, Length: 951

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Gram-negative soil bacterium. This is the most widely studied species in the genus. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003062:2506959:251900825190082519958951Agrobacterium tumefaciens str. C58 chromosome circular, completephosphoribosylaminoimidazole-succinocarboxamide synthase0650
NC_015183:2483653:249913424991342500084951Agrobacterium sp. H13-3 chromosome, complete genomephosphoribosylaminoimidazole- succinocarboxamidesynthase4e-175613
NC_008380:4078670:409633840963384097282945Rhizobium leguminosarum bv. viciae 3841, complete genomeputative phosphoribosylamidoimidazole-succinocarboxamide synthase1e-155549
NC_011985:194973:194973194973195962990Agrobacterium radiobacter K84 chromosome 1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-154546
NC_012850:3454270:347140834714083472352945Rhizobium leguminosarum bv. trifolii WSM1325, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase2e-154545
NC_010994:3666651:368433836843383685282945Rhizobium etli CIAT 652, complete genomephosphoribosylamidoimidazolesuccinocarboxamide synthase protein6e-154543
NC_007761:3564449:358285235828523583796945Rhizobium etli CFN 42, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase protein3e-153541
NC_011988:1036618:104187910418791042829951Agrobacterium vitis S4 chromosome 2, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase7e-144509
NC_007626:2204767:220887622088762209853978Magnetospirillum magneticum AMB-1, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase6e-116417
NC_019907:1060005:107178610717861072727942Liberibacter crescens BT-1 chromosome, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase7e-116417
NC_012985:779279:784943784943785914972Candidatus Liberibacter asiaticus str. psy62, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-114410
NC_014774:605085:612934612934613926993Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completephosphoribosylaminoimidazole-succinocarboxamide synthase2e-113409
NC_013501:1547508:156254415625441563530987Rhodothermus marinus DSM 4252, complete genomePhosphoribosylaminoimidazolesuccinocarboxamidesy nthase1e-72273
NC_007677:1872459:188253718825371883511975Salinibacter ruber DSM 13855, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase9e-70263
NC_013730:3208571:323369932336993234640942Spirosoma linguale DSM 74, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase2e-66253
NC_020054:4161049:416249741624974163447951Fibrella aestuarina BUZ 2 drat genomePhosphoribosylaminoimidazolesuccinocarboxamidesy nthase2e-63242
NC_014210:5270643:528106752810675281903837Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,phosphoribosylaminoimidazole-succinocarboxamide synthase2e-50199
NC_016077:702000:717473717473718384912Acidaminococcus intestini RyC-MR95 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-49196
NC_017093:8518961:852736685273668528205840Actinoplanes missouriensis 431, complete genomeputative phosphoribosylaminoimidazole-succinocarboxamide synthetase1e-48193
NC_015410:3502099:352518635251863526055870Pseudomonas mendocina NK-01 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-48192
NC_015737:2691246:270770627077062708587882Clostridium sp. SY8519, complete genomehypothetical protein2e-48192
NC_014910:4316706:431670643167064317626921Alicycliphilus denitrificans BC chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase3e-48192
NC_013422:2004478:202226020222602023180921Halothiobacillus neapolitanus c2, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-48191
NC_013729:2157785:217001221700122170854843Kribbella flavida DSM 17836, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase2e-47189
NC_008309:1553399:155672015567201557565846Haemophilus somnus 129PT, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase)8e-47187
NC_010571:1459363:146526914652691466177909Opitutus terrae PB90-1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-46186
NC_011898:426951:438189438189439085897Clostridium cellulolyticum H10, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase5e-45181
NC_016627:4535000:454225845422584543142885Clostridium clariflavum DSM 19732 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase8e-45181
NC_019815:761480:771944771944772822879Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiphosphoribosylaminoimidazole-succinocarboxamide synthase3e-44179
NC_002677:2642860:264503126450312645924894Mycobacterium leprae TN, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase9e-44177
NC_015222:1492500:149424914942491495139891Nitrosomonas sp. AL212 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-44177
NC_007759:964000:984989984989985873885Syntrophus aciditrophicus SB, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-43175
NC_013174:2564979:258628725862872587249963Jonesia denitrificans DSM 20603, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-42174
NC_012803:1980955:200194920019492002896948Micrococcus luteus NCTC 2665, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase3e-42172
NC_014314:576465:625492625492626406915Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completephosphoribosylaminoimidazole-succinocarboxamide synthase6e-42171
NC_008711:3701635:372163037216303722568939Arthrobacter aurescens TC1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-39163
NC_020299:127480:141788141788142663876Candidatus Kinetoplastibacterium oncopeltii TCC290E, completephosphoribosylaminoimidazole-succinocarboxamide synthase2e-37156
NC_015690:8019859:802318680231868024079894Paenibacillus mucilaginosus KNP414 chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamide synthase4e-36152
NC_009665:593359:6056306056306067331104Shewanella baltica OS185 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-24113
NC_004347:4211241:4219693421969342207961104Shewanella oneidensis MR-1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase3e-24112
NC_009052:4437649:4442693444269344437961104Shewanella baltica OS155, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase5e-24112
NC_009831:3092126:3096246309624630973521107Shewanella sediminis HAW-EB3, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide synthase5e-24111
NC_017179:281069:285836285836286534699Clostridium difficile BI1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-1375.5
NC_012926:30351:307173071731424708Streptococcus suis BM407 chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamide synthase6e-1375.1
NC_012924:29353:307193071931426708Streptococcus suis SC84, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-1375.1
NC_009443:29349:307153071531422708Streptococcus suis 98HAH33, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-1375.1
NC_012925:29353:307193071931426708Streptococcus suis P1/7, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-1375.1
NC_014171:261952:320708320708321427720Bacillus thuringiensis BMB171 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-1274.3
NC_014537:542515:558823558823559542720Vulcanisaeta distributa DSM 14429 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamides ynthase1e-1274.3
NC_015151:1872280:190505819050581905777720Vulcanisaeta moutnovskia 768-28 chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamidesy nthase3e-1272.8
NC_017208:256163:310366310366311085720Bacillus thuringiensis serovar chinensis CT-43 chromosome, completephosphoribosylaminoimidazolesuccinocarboxamide synthase4e-1272.4
NC_014471:217279:221636221636222367732Ignisphaera aggregans DSM 17230 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-1170.9
NC_015958:677500:693819693819694526708Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-1170.9
NC_015499:119200:133283133283133978696Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase2e-1170.1
NC_016830:1645879:165116916511691651882714Pseudomonas fluorescens F113 chromosome, complete genomeprotein PurC3e-1169.3
NC_016023:1725294:174059817405981741308711Bacillus coagulans 36D1 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase5e-1168.9
NC_010501:4379920:439418143941814394891711Pseudomonas putida W619, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-1168.6
NC_011567:238249:255046255046255768723Anoxybacillus flavithermus WK1, complete genomePhosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase6e-1168.6
NC_008023:35663:356633566336397735Streptococcus pyogenes MGAS2096, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase5e-1168.6
NC_008021:35661:356613566136395735Streptococcus pyogenes MGAS9429, complete genomephosphoribosylamidoimidazole-succinocarboxamide synthase5e-1168.6
NC_007296:35661:356613566136395735Streptococcus pyogenes MGAS6180, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase5e-1168.6
NC_006086:35599:768277682777561735Streptococcus pyogenes MGAS10394, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase7e-1168.2
NC_018704:433402:438580438580439290711Amphibacillus xylanus NBRC 15112, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase8e-1168.2
NC_008024:35948:359483594836682735Streptococcus pyogenes MGAS10750, complete genomePhosphoribosylamidoimidazole-succinocarboxamide synthase9e-1167.8
NC_008022:35983:359833598336717735Streptococcus pyogenes MGAS10270, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase1e-1067.4
NC_003485:35971:359713597136705735Streptococcus pyogenes MGAS8232, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-1067.4
NC_017986:4091051:409517040951704095880711Pseudomonas putida ND6 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase1e-1067.4
NC_010556:462500:477424477424478131708Exiguobacterium sibiricum 255-15, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-1067
NC_010723:1084000:109376910937691094476708Clostridium botulinum E3 str. Alaska E43, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-1067
NC_007005:1738500:174414717441471744857711Pseudomonas syringae pv. syringae B728a, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-1066.2
NC_010674:1124431:113187111318711132578708Clostridium botulinum B str. Eklund 17B, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-1066.2
NC_013928:9494:317583175832465708Streptococcus mutans NN2025, complete genomephosphoribosylaminoimidazole- succinocarboxamide synthase1e-0964.3
NC_020291:1266885:127403712740371274744708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase PurC2e-0963.5
NC_014829:443500:450336450336451049714Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-0963.5
NC_011999:728353:741524741524742225702Macrococcus caseolyticus JCSC5402, complete genomephosphoribosylaminoimidazole succinocarboxamide synthetase2e-0963.2
NC_014935:1511835:151606915160691516788720Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-0963.2
NC_009633:947695:953881953881954591711Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamide synthase4e-0962.8
NC_009440:1908864:191147619114761912177702Metallosphaera sedula DSM 5348 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-0962.4
NC_015320:1342105:1367980136798013689991020Archaeoglobus veneficus SNP6 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase8e-0961.2
NC_021182:2059143:206740820674082068118711Clostridium pasteurianum BC1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-0860.5
NC_007181:1364522:136828513682851368992708Sulfolobus acidocaldarius DSM 639, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase3e-0859.3
NC_018665:422451:437183437183437890708Exiguobacterium antarcticum B7 chromosome, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase4e-0859.3
NC_004461:746284:753286753286753990705Staphylococcus epidermidis ATCC 12228, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-0858.9
NC_002976:638799:645802645802646506705Staphylococcus epidermidis RP62A, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase4e-0858.9
NC_020164:1784223:179606917960691796773705Staphylococcus warneri SG1, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-0858.5
NC_014614:356746:380849380849381544696Clostridium sticklandii, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthetase1e-0757.4
NC_007797:107950:127341127341128075735Anaplasma phagocytophilum HZ, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-0757
NC_007168:1923723:193754319375431938247705Staphylococcus haemolyticus JCSC1435, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase6e-0755.1
NC_004193:783958:789966789966790679714Oceanobacillus iheyensis HTE831, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase8e-0754.7
NC_010520:3120500:313218831321883132892705Clostridium botulinum A3 str. Loch Maree, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase7e-0754.7
NC_014633:265086:278102278102278812711Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencephosphoribosylaminoimidazole-succinocarboxamide synthase1e-0654.3
NC_011653:1463743:148738914873891488075687Thermosipho africanus TCF52B, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase2e-0653.5
NC_015161:199666:203362203362204075714Deinococcus proteolyticus MRP chromosome, complete genomePhosphoribosylaminoimidazole-succinocarboxamide synthase4e-0652.4
NC_015435:251958:274431274431275135705Metallosphaera cuprina Ar-4 chromosome, complete genomephosphoribosylaminoimidazole-succinocarboxamide synthase9e-0651.2