Pre_GI: BLASTN Hits

Some Help

Query: NC_003228:3545811 Bacteroides fragilis NCTC 9343, complete genome

Start: 3545811, End: 3564728, Length: 18918

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006347:3638165*3638165365637318209Bacteroides fragilis YCH46, complete genome028040BLASTN svgBLASTP svg
NC_014933:2240000*2240000226386823869Bacteroides helcogenes P 36-108 chromosome, complete genome0650BLASTN svgBLASTP svg
NC_015164:1120288*1120288114009919812Bacteroides salanitronis DSM 18170 chromosome, complete genome3e-64254BLASTN svgBLASTP svg
NC_015164:29004290045278723784Bacteroides salanitronis DSM 18170 chromosome, complete genome2e-52214BLASTN svgBLASTP svg
NC_015571:1495286*1495286151559920314Porphyromonas gingivalis TDC60, complete genome1e-41178BLASTN svgBLASTP svg
NC_010729:1818500*1818500183909920600Porphyromonas gingivalis ATCC 33277, complete genome1e-41178BLASTN svgBLASTP svg
NC_002950:353549*35354937859925051Porphyromonas gingivalis W83, complete genome1e-41178BLASTN svgBLASTP svg
NC_015321:41428434142843416451121669Fluviicola taffensis DSM 16823 chromosome, complete genome3e-33151BLASTN svgBLASTP svg
NC_014033:619469*61946964956330095Prevotella ruminicola 23 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_011565:1*12397423974Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,4e-1797.6BLASTN svgBLASTP svg
NC_013730:1572889*1572889159761124723Spirosoma linguale DSM 74, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013715:14459591445959146809922141Rothia mucilaginosa DY-18, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014365:2359760*2359760238225722498Desulfarculus baarsii DSM 2075 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015144:12844531284453130816623714Weeksella virosa DSM 16922 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012026:21385*213854495323569Anaplasma marginale str. Florida, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014964:1695000*1695000172192326924Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete1e-1075.8BLASTN svgBLASTP svg
NC_015556:51564151564153855622916Pseudomonas fulva 12-X chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014614:2500301*2500301252659926299Clostridium sticklandii, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_012559:23532362353236237609922864Laribacter hongkongensis HLHK9, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012039:1399699*1399699142559925901Campylobacter lari RM2100, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008751:1851358*1851358187328321926Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015573:569625*56962560324033616Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011978:975333*975333100082825496Thermotoga neapolitana DSM 4359, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004663:22467562246756226742420669Bacteroides thetaiotaomicron VPI-5482, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_000117:845141*84514189495049810Chlamydia trachomatis D/UW-3/CX, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013216:644408*64440867216327756Desulfotomaculum acetoxidans DSM 771, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009952:3596399*3596399364016143763Dinoroseobacter shibae DFL 12, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome9e-0660BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome9e-0660BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome9e-0660BLASTN svgBLASTP svg
NC_009089:1*13459934599Clostridium difficile 630, complete genome9e-0660BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome9e-0660BLASTN svgBLASTP svg
NC_002937:1634287*1634287165975925473Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete9e-0660BLASTN svgBLASTP svg