Pre_GI: BLASTP Hits

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Query: NC_003228:648669:658180 Bacteroides fragilis NCTC 9343, complete genome

Start: 658180, End: 658779, Length: 600

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:701684:713814713814714413600Bacteroides fragilis 638R, complete genomeputative LuxR family transcriptional regulator2e-113407
NC_006347:700838:710349710349710945597Bacteroides fragilis YCH46, complete genomeLuxR family transcriptional regulator1e-112405
NC_007644:3229:247052470525370666Moorella thermoacetica ATCC 39073, complete genometwo component transcriptional regulator, LuxR family3e-0858.5
NC_009523:585367:6023956023956038101416Roseiflexus sp. RS-1 chromosome, complete genomeresponse regulator receiver protein3e-0858.2
NC_015379:3175500:318305931830593183796738Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative response regulator, NarL family9e-0857
NC_013595:1851226:186206318620631862716654Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein7e-0857
NC_016830:3697173:370346837034683703962495Pseudomonas fluorescens F113 chromosome, complete genomeLuxR family transcriptional regulator1e-0756.2
NC_008027:3844355:386445738644573865245789Pseudomonas entomophila L48, complete genometranscriptional regulator, LuxR family1e-0756.2
NC_009328:448224:494722494722495354633Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA-binding response regulator2e-0755.8
NC_004129:3123000:312730831273083128099792Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LuxR family2e-0755.5
NC_016609:7565483:756548375654837566118636Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0755.5
NC_006322:2658587:267722626772262677870645Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0755.1
NC_006270:2657726:267636626763662677010645Bacillus licheniformis ATCC 14580, complete genometwo-component response regulator3e-0755.1
NC_003155:7979050:798241379824137983084672Streptomyces avermitilis MA-4680, complete genometwo-component system response regulator4e-0754.7
NC_015065:18189:387313873139354624Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetwo component transcriptional regulator, LuxR family4e-0754.7
NC_003888:1751179:176915617691561769827672Streptomyces coelicolor A3(2), complete genometwo-component response regulator5e-0754.3
NC_008835:2133696:213649421364942137288795Burkholderia mallei NCTC 10229 chromosome I, complete sequenceDNA-binding response regulator5e-0754.3
NC_002947:4362271:437030543703054371102798Pseudomonas putida KT2440, complete genometranscriptional regulator, LuxR family7e-0753.9
NC_006349:1630514:164867516486751649346672Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceDNA-binding response regulator7e-0753.9
NC_009079:705931:708879708879709523645Burkholderia mallei NCTC 10247 chromosome I, complete sequenceDNA-binding response regulator7e-0753.9
NC_015844:3524175:355116435511643551826663Zobellia galactanivorans, complete genometwo-component system-Response regulator6e-0753.9
NC_007795:2455468:245889824588982459500603Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein1e-0653.5
NC_013450:2463271:246426924642692464871603Staphylococcus aureus subsp. aureus ED98, complete genometranscriptional regulatory protein DegU, putative1e-0653.5
NC_017341:2544327:254532525453252545927603Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,LuxR family two component transcriptional regulator1e-0653.5
NC_017343:2367177:237060623706062371208603Staphylococcus aureus subsp. aureus ECT-R 2, complete genometranscriptional regulatory protein degU (Protease production enhancerprotein)1e-0653.5
NC_017347:2511783:251278125127812513383603Staphylococcus aureus subsp. aureus T0131 chromosome, completeOxygen regulatory protein nreC1e-0653.5
NC_017351:2489460:249105724910572491659603Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeoxygen regulatory protein nreC1e-0653.5
NC_018515:1406816:1406816140681614094732658Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent transcriptional regulator9e-0753.5
NC_017353:646195:661369661369662022654Staphylococcus lugdunensis N920143, complete genomeputative response regulator9e-0753.5
NC_015497:2859724:287195728719572872604648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometwo component transcriptional regulator, LuxR family9e-0753.5
NC_009614:915605:917614917614918384771Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator8e-0753.5
NC_010079:2510951:251194925119492512602654Staphylococcus aureus subsp. aureus USA300_TCH1516, completetranscriptional regulator1e-0653.1
NC_002745:2446722:244772024477202448373654Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein1e-0653.1
NC_009782:2519379:252037725203772521030654Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-0653.1
NC_003923:2460130:246112824611282461781654Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-0653.1
NC_002758:2515310:251873925187392519392654Staphylococcus aureus subsp. aureus Mu50, complete genomeresponse regulators of two-component regulatory1e-0653.1
NC_007793:2510801:251179925117992512452654Staphylococcus aureus subsp. aureus USA300, complete genometranscriptional regulator, DegU family1e-0653.1
NC_002953:2435667:244029424402942440947654Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative response regulator1e-0653.1
NC_002951:2448000:244823224482322448885654Staphylococcus aureus subsp. aureus COL, complete genometranscriptional regulatory protein DegU, putative1e-0653.1
NC_009632:2545419:254884825488482549501654Staphylococcus aureus subsp. aureus JH1 chromosome, completeresponse regulator receiver1e-0653.1
NC_009641:2513300:251673025167302517383654Staphylococcus aureus subsp. aureus str. Newman chromosome,transcriptional regulator DegU family protein1e-0653.1
NC_016912:2329113:233011123301112330764654Staphylococcus aureus subsp. aureus VC40 chromosome, completeDegU family transcriptional regulator1e-0653.1
NC_019771:1356000:136497313649731365605633Anabaena cylindrica PCC 7122, complete genometwo component transcriptional regulator, LuxR family1e-0653.1
NC_017342:857630:875234875234875836603Staphylococcus aureus subsp. aureus TCH60 chromosome, completeLuxR family DNA-binding response regulator1e-0653.1
NC_017337:2478877:248076724807672481369603Staphylococcus aureus subsp. aureus ED133 chromosome, completetwo-component response regulator1e-0653.1
NC_016928:2411486:241248424124842413086603Staphylococcus aureus subsp. aureus M013 chromosome, completetwo-component response regulator1e-0653.1
NC_010162:7620000:762793276279327628660729Sorangium cellulosum 'So ce 56', complete genometwo-component system response regulator1e-0653.1
NC_017338:2456000:245638824563882457041654Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeLuxR family two component transcriptional regulator1e-0653.1
NC_007622:2399347:240034424003442400997654Staphylococcus aureus RF122, complete genometwo-component response regulator1e-0653.1
NC_002952:2550500:255266825526682553321654Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative response regulator1e-0653.1
NC_020995:2255521:225627422562742256903630Enterococcus casseliflavus EC20, complete genomeLuxR family DNA-binding response regulator1e-0652.8
NC_013929:8106492:811467981146798115350672Streptomyces scabiei 87.22 chromosome, complete genometwo-component response regulator2e-0652.8
NC_016941:2395502:239731123973112397964654Staphylococcus aureus subsp. aureus MSHR1132, complete genomeoxygen regulatory protein NreC2e-0652.4
NC_016047:2658000:265939126593912660035645Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetwo component response regulator3e-0652
NC_015856:4975815:499871249987124999350639Collimonas fungivorans Ter331 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0652
NC_014215:1929000:193663719366371937302666Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Two-component system response regulator3e-0651.6
NC_008699:3516608:3516608351660835181461539Nocardioides sp. JS614, complete genomeregulatory protein, LuxR4e-0651.6
NC_008314:2744553:275027627502762750995720Ralstonia eutropha H16 chromosome 2, complete sequenceresponse regulator, NarL-family4e-0651.2
NC_011567:2556915:257353525735352574317783Anoxybacillus flavithermus WK1, complete genomeDNA-binding response regulator, NarL family (REC-HTH domains)6e-0650.8
NC_014147:765941:769906769906770562657Moraxella catarrhalis RH4 chromosome, complete genometwo-component system nitrate/nitrite response regulator NarL6e-0650.8
NC_014829:3305762:330576233057623306394633Bacillus cellulosilyticus DSM 2522 chromosome, complete genometwo component transcriptional regulator, LuxR family5e-0650.8
NC_009767:5464796:546773054677305468371642Roseiflexus castenholzii DSM 13941, complete genometwo component transcriptional regulator, LuxR family5e-0650.8
NC_008278:1876435:187968118796811880322642Frankia alni ACN14a, complete genomePutative two-component system response regulator6e-0650.4
NC_009614:561279:585992585992586636645Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator7e-0650.4
NC_007907:5185510:524467952446795245317639Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-0650.4