Pre_GI: BLASTP Hits

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Query: NC_003228:3934770:3948742 Bacteroides fragilis NCTC 9343, complete genome

Start: 3948742, End: 3949587, Length: 846

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:3973428:398739639873963988241846Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein1e-165582
NC_006347:4031000:404498540449854045563579Bacteroides fragilis YCH46, complete genometranscriptional regulator3e-110398
NC_004663:2437760:247120524712052472053849Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator5e-102370
NC_009615:919495:925663925663926541879Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator9e-34144
NC_006347:854301:873322873322874197876Bacteroides fragilis YCH46, complete genomehypothetical protein2e-29129
NC_016776:844641:860760860760861635876Bacteroides fragilis 638R, complete genomeputative AraC-family regulatory protein4e-29128
NC_003228:793846:809965809965810840876Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family regulatory protein4e-29128
NC_006347:4031000:404564840456484045830183Bacteroides fragilis YCH46, complete genometranscriptional regulator1e-28127
NC_003228:2437288:244229724422972443136840Bacteroides fragilis NCTC 9343, complete genomeputative AraC-type transcriptional regulator6e-27121
NC_006347:2375480:238632923863292387168840Bacteroides fragilis YCH46, complete genomeAraC-type transcription regulator6e-27121
NC_016776:2516149:252699725269972527836840Bacteroides fragilis 638R, complete genomeputative AraC-type transcriptional regulator1e-26120
NC_004663:1365429:137704613770461377882837Bacteroides thetaiotaomicron VPI-5482, complete genomeAraC-type transcription regulator6e-23108
NC_003228:3085793:308968830896883090575888Bacteroides fragilis NCTC 9343, complete genomeputative AraC-family transcriptional regulator6e-23108
NC_004129:926479:934135934135934989855Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-22107
NC_013730:4502965:452139745213974522266870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family6e-23107
NC_015947:1937341:195358619535861954440855Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator5e-22105
NC_014364:3633291:363889336388933639771879Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, AraC family9e-22104
NC_014933:3856561:387760838776083878456849Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family9e-22103
NC_009614:3081190:309934830993483100256909Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein1e-20100
NC_015164:1952500:195627119562711957128858Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family8e-2097.8
NC_004663:3680974:369676236967623697673912Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator5e-1995.1
NC_014933:3791840:381156138115613812442882Bacteroides helcogenes P 36-108 chromosome, complete genomehelix-turn-helix- domain containing protein AraC type6e-1891.7
NC_004663:2246756:224892422489242249814891Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transcriptional regulator2e-1789.7
NC_016609:4233701:424485042448504245719870Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-1787.4
NC_014933:979063:983963983963984871909Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family1e-1687
NC_015434:1885373:188757818875781888468891Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix, arac domain-containing protein2e-1480.1
NC_014391:1812500:181434718143471815264918Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-1375.9
NC_014815:2055286:205897420589742059891918Micromonospora sp. L5 chromosome, complete genomehelix-turn-helix, arac domain protein3e-1375.9
NC_009901:3317068:332237033223703323242873Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family7e-1374.7
NC_019960:306254:333554333554334501948Prevotella dentalis DSM 3688 chromosome 1, complete sequenceDNA-binding domain-containing protein, AraC-type4e-1272
NC_013132:153163:156153156153157094942Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family6e-1168.2
NC_004663:1409462:141252814125281413448921Bacteroides thetaiotaomicron VPI-5482, complete genometranscriptional regulator8e-1167.8
NC_016582:1639375:165691016569101657806897Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator9e-1167.8
NC_013730:778076:782821782821783741921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-1066.2
NC_015703:4483500:451260045126004513517918Runella slithyformis DSM 19594 chromosome, complete genomeAraC family transcriptional regulator3e-1066.2
NC_009441:3522519:353988035398803540680801Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1065.9
NC_013730:4811911:482916548291654830043879Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-1065.9
NC_019673:3726519:373763037376303738475846Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator3e-1065.9
NC_014622:724000:725554725554726447894Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator4e-1065.5
NC_009441:3562125:357912935791293579977849Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1064.7
NC_016609:2730449:273712227371222738024903Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-1064.3
NC_010468:4059436:405943640594364060326891Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family1e-0963.9
NC_012880:1585255:160704616070461608035990Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family1e-0963.9
NC_013037:1015210:103550010355001036360861Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family1e-0963.9
NC_004547:1873390:188300518830051883862858Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-0963.5
NC_009441:4218434:423875042387504239445696Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0962.4
NC_014934:4834000:483478048347804835673894Cellulophaga algicola DSM 14237 chromosome, complete genometranscriptional regulator, arac family3e-0962.4
NC_013730:4502965:452028045202804521137858Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0962.4
NC_009441:5248791:526511952651195265988870Flavobacterium johnsoniae UW101 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0962.4
NC_002950:879930:883361883361884209849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family8e-0961.2
NC_002950:1511955:153145315314531532301849Porphyromonas gingivalis W83, complete genometranscriptional regulator, AraC family8e-0961.2
NC_018681:5490963:551799755179975518839843Nocardia brasiliensis ATCC 700358 chromosome, complete genometranscriptional regulatory protein1e-0860.5
NC_016609:1305570:130853413085341309397864Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator1e-0860.5
NC_012962:1041518:106408610640861064976891Photorhabdus asymbiotica, complete genomeregulator of the 4hpa-hydroxylase operon2e-0860.1
NC_017986:5605197:563115756311575632029873Pseudomonas putida ND6 chromosome, complete genomeHelix-turn-helix domain-containing protein2e-0860.1
NC_014655:2366201:237290323729032373763861Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arac family2e-0860.1
NC_019968:1084288:110312511031251103973849Prevotella dentalis DSM 3688 chromosome 2, complete sequenceDNA-binding domain-containing protein, AraC-type3e-0859.7
NC_010338:4148667:416203941620394162932894Caulobacter sp. K31, complete genometranscriptional regulator, AraC family2e-0859.7
NC_020054:3132478:313830531383053139264960Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family3e-0859.3
NC_014041:1395761:140434314043431404846504Zunongwangia profunda SM-A87 chromosome, complete genome4-hydroxyphenylacetate catabolism regulatory protein HpaA4e-0858.9
NC_015690:1818333:1872120187212018737301611Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYbbB8e-0857.8
NC_016935:2347691:2401895240189524035051611Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein8e-0857.8
NC_020054:4161049:4187679418767941887041026Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family9e-0857.8
NC_013730:4811911:482723048272304828150921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family2e-0756.6
NC_015311:2626850:264619326461932647041849Prevotella denticola F0289 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_016609:606000:611143611143612063921Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_014933:3688000:370697437069743707867894Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family4e-0755.5
NC_013132:6385223:640559164055916406514924Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family5e-0755.1
NC_013730:2359939:235993923599392360808870Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family6e-0755.1
NC_014624:2668157:271610827161082716983876Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator7e-0754.7
NC_013132:1652477:165247716524771653346870Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0654.3
NC_015436:1287873:128864712886471289450804Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, AraC family1e-0653.5
NC_004547:1837500:184938418493841850334951Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-0653.1
NC_010623:1961685:201867520186752019634960Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0652.8
NC_013730:4399643:440355544035554404475921Spirosoma linguale DSM 74, complete genometranscriptional regulator, AraC family3e-0652.4
NC_018664:1:195971959720280684Clostridium acidurici 9a chromosome, complete genomeAraC family transcriptional regulator4e-0652.4