Pre_GI: BLASTP Hits

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Query: NC_003228:1870953:1870953 Bacteroides fragilis NCTC 9343, complete genome

Start: 1870953, End: 1872200, Length: 1248

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism can become an opportunistic pathogen, infecting anywhere in the body and causing abcess formation. Enterotoxigenic Bacterioides fragilis (ETBF) is associated with diarrheal diseases. Common gut bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:5538323:5561068556106855623151248Spirosoma linguale DSM 74, complete genomeefflux transporter, RND family, MFP subunit2e-77290
NC_020156:144707:1447071447071458941188Nonlabens dokdonensis DSW-6, complete genomeefflux transporter, RND family, MFP subunit3e-62239
NC_015976:2900891:2923548292354829247981251Sphingobium sp. SYK-6, complete genomeHlyD family secretion protein5e-62238
NC_004088:2937077:2946491294649129477531263Yersinia pestis KIM, complete genomehypothetical protein2e-21103
NC_008150:905000:9137459137459150071263Yersinia pestis Antiqua, complete genomehypothetical protein2e-21103
NC_008149:2773139:2782553278255327838151263Yersinia pestis Nepal516, complete genomehypothetical protein2e-21103
NC_009708:2788855:2798271279827127995331263Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRND family efflux transporter MFP subunit2e-21103
NC_010634:1809500:1818109181810918193711263Yersinia pseudotuberculosis PB1/+, complete genomeRND family efflux transporter MFP subunit3e-21103
NC_006155:1807902:1817900181790018191621263Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-21103
NC_005810:1520000:1528785152878515300471263Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-21103
NC_003143:1691000:1699881169988117011431263Yersinia pestis CO92, complete genomehypothetical protein2e-21103
NC_017265:2557476:2566890256689025681521263Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-21103
NC_017168:3948514:3957928395792839591901263Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-21103
NC_017160:2054289:2063703206370320649651263Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-21103
NC_017154:1707500:1716479171647917177411263Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-21103
NC_014029:1760948:1774386177438617756481263Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-21103
NC_009381:1655731:1665145166514516664071263Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-21103
NC_010465:2820500:2828719282871928299811263Yersinia pseudotuberculosis YPIII, complete genomeefflux transporter, RND family, MFP subunit4e-21102
NC_010159:3169266:3174555317455531758171263Yersinia pestis Angola, complete genomeefflux transporter, RND family, MFP subunit7e-21102
NC_008095:8698766:8726992872699287282361245Myxococcus xanthus DK 1622, complete genomeefflux transporter, RND family, MFP subunit8e-2098.6
NC_008800:3061484:3071142307114230724041263Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-1996.7
NC_015224:1703130:1712810171281017140721263Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-1894.7
NC_014541:2325780:2339249233924923405021254Ferrimonas balearica DSM 9799 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-1376.3
NC_009615:2311352:2334521233452123359331413Parabacteroides distasonis ATCC 8503 chromosome, complete genomeABC transporter permease1e-1275.1
NC_015499:1167932:1167932116793211690381107Thermodesulfobium narugense DSM 14796 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-1066.2
NC_014933:2525393:2539206253920625404531248Bacteroides helcogenes P 36-108 chromosome, complete genomeefflux transporter, RND family, MFP subunit3e-0963.5
NC_012997:2405500:2416442241644224176921251Teredinibacter turnerae T7901, complete genomeefflux transporter, RND family, MFP subunit5e-0962.8
NC_013385:1882549:1913095191309519143181224Ammonifex degensii KC4, complete genomeefflux transporter, RND family, MFP subunit1e-0861.2
NC_011769:3712497:3728452372845237297441293Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeefflux transporter, RND family, MFP subunit2e-0860.5
NC_015177:2972701:2992043299204329931131071Pedobacter saltans DSM 12145 chromosome, complete genomeefflux transporter, RND family, MFP subunit8e-0858.5
NC_015172:237397:2483062483062494151110Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-0757.8
NC_002655:1053082:1051943105194310530851143Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-0756.2
NC_011901:342777:3416473416473427801134Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeRND family efflux transporter MFP subunit4e-0756.2
NC_014532:1191267:1191267119126711925441278Halomonas elongata DSM 2581, complete genomeefflux transporter, RND family, MFP subunit7e-0755.5
NC_014926:1108811:1108811110881111100521242Thermovibrio ammonificans HB-1 chromosome, complete genomeefflux transporter, RND family, MFP subunit1e-0654.7
NC_015589:626321:6294526294526305821131Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRND family efflux transporter MFP subunit1e-0654.7
NC_012808:2886282:2891351289135128925201170Methylobacterium extorquens AM1, complete genomemultidrug efflux system1e-0654.7
NC_012658:99899:1133711133711144321062Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative macrolide efflux transporter, RND family, MFP subunit1e-0654.3
NC_015565:431273:4348684348684359981131Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeRND family efflux transporter MFP subunit2e-0654.3
NC_010515:2449143:2451191245119124523841194Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceefflux transporter, RND family, MFP subunit2e-0653.5
NC_015500:1204501:1204501120450112055441044Treponema brennaborense DSM 12168 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-0653.1
NC_006155:3212796:3213667321366732148721206Yersinia pseudotuberculosis IP 32953, complete genomeputative HlyD family (ABC efflux pump associated) secretion protein4e-0653.1
NC_008149:1556581:1574283157428315754881206Yersinia pestis Nepal516, complete genomeHlyD family secretion protein4e-0653.1
NC_005810:2905362:2907608290760829088131206Yersinia pestis biovar Microtus str. 91001, complete genomeHlyD family secretion protein4e-0653.1
NC_010159:2878499:2879370287937028805751206Yersinia pestis Angola, complete genomeefflux ABC transporter, RND family, MFP subunit4e-0653.1
NC_003143:3346834:3349080334908033502851206Yersinia pestis CO92, complete genomeputative HlyD family secretion protein4e-0653.1
NC_008150:2451872:2454118245411824553231206Yersinia pestis Antiqua, complete genomeputative HlyD family secretion protein4e-0653.1
NC_004088:1622941:1644360164436016455651206Yersinia pestis KIM, complete genomemembrane protein, possible efflux component4e-0653.1
NC_009381:2373847:2374718237471823759231206Yersinia pestis Pestoides F chromosome, complete genomeHlyD family secretion protein4e-0653.1
NC_014029:3401238:3403484340348434046891206Yersinia pestis Z176003 chromosome, complete genomeputative HlyD family secretion protein4e-0653.1
NC_010634:3129174:3131420313142031326251206Yersinia pseudotuberculosis PB1/+, complete genomeRND family efflux transporter MFP subunit3e-0653.1
NC_010465:1550617:1572050157205015732551206Yersinia pseudotuberculosis YPIII, complete genomeefflux transporter, RND family, MFP subunit3e-0653.1
NC_009708:1522281:1537447153744715386521206Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRND efflux transporter4e-0653.1
NC_017265:1346685:1363521136352113647261206Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative HlyD family secretion protein4e-0653.1
NC_017168:2394079:2411781241178124129861206Yersinia pestis A1122 chromosome, complete genomeRND family efflux transporter MFP subunit4e-0653.1
NC_017160:3326199:3328445332844533296501206Yersinia pestis D182038 chromosome, complete genomeputative HlyD family secretion protein4e-0653.1
NC_017154:3344273:3346519334651933477241206Yersinia pestis D106004 chromosome, complete genomeputative HlyD family secretion protein4e-0653.1
NC_020054:2679676:2697069269706926982201152Fibrella aestuarina BUZ 2 drat genomeefflux transporter, RND family, MFP subunit5e-0652.8
NC_010002:2933909:2955756295575629569071152Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit7e-0652.4
NC_021172:3655206:3658378365837836595921215Hyphomicrobium denitrificans 1NES1, complete genomeRND family efflux transporter MFP subunit9e-0652
NC_007298:1759881:1798600179860017997901191Dechloromonas aromatica RCB, complete genomeSecretion protein HlyD9e-0652