Pre_GI: BLASTN Hits

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Query: NC_003210:2380419 Listeria monocytogenes EGD-e, complete genome

Start: 2380419, End: 2398599, Length: 18181

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome05907BLASTN svgBLASTP svg
NC_003212:2413824*2413824244446830645Listeria innocua Clip11262, complete genome01574BLASTN svgBLASTP svg
NC_003210:23623062362306238100918704Listeria monocytogenes EGD-e, complete genome0985BLASTN svgBLASTP svg
NC_008555:12040001204000124219438195Listeria welshimeri serovar 6b str. SLCC5334, complete genome0696BLASTN svgBLASTP svg
NC_005957:5203915*5203915522509921185Bacillus thuringiensis serovar konkukian str. 97-27, complete1e-1075.8BLASTN svgBLASTP svg
NC_006274:5267585*5267585529331825734Bacillus cereus E33L, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_012472:5239944*5239944525821718274Bacillus cereus 03BB102, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete1e-1075.8BLASTN svgBLASTP svg
NC_007530:5197854*5197854521982221969Bacillus anthracis str. 'Ames Ancestor', complete genome3e-0867.9BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome3e-0867.9BLASTN svgBLASTP svg