Pre_GI: BLASTP Hits

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Query: NC_003210:2749538:2770060 Listeria monocytogenes EGD-e, complete genome

Start: 2770060, End: 2771439, Length: 1380

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012488:2719955:2740207274020727415861380Listeria monocytogenes Clip81459, complete genomelysine decarboxylase0923
NC_002973:2701983:2722235272223527236141380Listeria monocytogenes str. 4b F2365, complete genomeOrn/Lys/Arg decarboxylase0921
NC_013891:2643085:2664601266460126659801380Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeOrn/Lys/Arg decarboxylase0787
NC_011567:1:3468934689361131425Anoxybacillus flavithermus WK1, complete genomeArginine/lysine/ornithine decarboxylase9e-99360
NC_014976:2231984:2253476225347622549181443Bacillus subtilis BSn5 chromosome, complete genomeputative lysine decarboxylase3e-93342
NC_004193:35698:3746537465388831419Oceanobacillus iheyensis HTE831, complete genomelysine decarboxylase1e-92340
NC_014171:1:3483334833362541422Bacillus thuringiensis BMB171 chromosome, complete genomearginine decarboxylase2e-87323
NC_017208:1:3438634386358071422Bacillus thuringiensis serovar chinensis CT-43 chromosome, completearginine decarboxylase3e-87322
NC_012121:113912:1267951267951281441350Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative Orn/Lys/Arg decarboxylase1e-75283
NC_010556:26567:4078740787421961410Exiguobacterium sibiricum 255-15, complete genomeArginine decarboxylase2e-72273
NC_003869:74836:9599295992974221431Thermoanaerobacter tengcongensis MB4, complete genomeArginine/lysine/ornithine decarboxylase5e-70265
NC_012673:1650139:1655223165522316566411419Exiguobacterium sp. AT1b, complete genomeOrn/Lys/Arg decarboxylase major region8e-69261
NC_014219:25845:4379243792452581467Bacillus selenitireducens MLS10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region5e-68258
NC_009706:3845039:3845039384503938464781440Clostridium kluyveri DSM 555 chromosome, complete genomeprotein SpeA23e-67256
NC_011837:3776541:3776541377654137779801440Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-67256
NC_014964:2199252:2199252219925222006731422Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeOrn/Lys/Arg decarboxylase major region2e-67256
NC_010321:2207364:2212107221210722135281422Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeOrn/Lys/Arg decarboxylase, major region2e-67256
NC_010163:1361217:1374513137451313759881476Acholeplasma laidlawii PG-8A chromosome, complete genomelysine decarboxylase4e-67255
NC_014410:51711:8720187201886221422Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Orn/Lys/Arg decarboxylase major region8e-67254
NC_019970:35985:7365373653750741422Thermoanaerobacterium thermosaccharolyticum M0795, complete genomearginine/lysine/ornithine decarboxylase4e-66252
NC_003366:2788268:2799143279914328005731431Clostridium perfringens str. 13, complete genomeprobable lysine decarboxylase1e-65250
NC_015555:49842:8697586975883961422Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeArginine decarboxylase2e-65250
NC_009633:74500:99846998461012761431Alkaliphilus metalliredigens QYMF chromosome, complete genomeOrn/Lys/Arg decarboxylase, major region8e-65248
NC_012658:3387774:3391191339119133926511461Clostridium botulinum Ba4 str. 657 chromosome, complete genomeOrn/Lys/Arg decarboxylase3e-64246
NC_020134:1328302:1346064134606413475241461Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA3e-64246
NC_009698:3185359:3186102318610231875621461Clostridium botulinum A str. Hall chromosome, complete genomeOrn/Lys/Arg decarboxylase8e-64244
NC_009495:3309550:3313006331300633144661461Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeOrn/Lys/Arg decarboxylase8e-64244
NC_016012:879972:8977828977828992391458Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeOrn/Lys/Arg decarboxylase major region1e-63244
NC_010516:3368951:3373629337362933750891461Clostridium botulinum B1 str. Okra, complete genomeOrn/Lys/Arg decarboxylase1e-63244
NC_014328:85290:1403051403051417531449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomearginine decarboxylase2e-63243
NC_003030:303812:3528673528673543121446Clostridium acetobutylicum ATCC 824, complete genomeLysine decarboxylase4e-62239
NC_015687:303810:3528633528633543081446Clostridium acetobutylicum DSM 1731 chromosome, complete genomelysine decarboxylase4e-62239
NC_014392:1935130:1957506195750619590381533Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region6e-62238
NC_014652:757381:7680177680177694981482Caldicellulosiruptor hydrothermalis 108 chromosome, completeorn/lys/arg decarboxylase major region8e-61234
NC_014483:3235968:3235968323596832374431476Paenibacillus polymyxa E681 chromosome, complete genomeArginine decarboxylase2e-59230
NC_014622:3525017:3526491352649135279661476Paenibacillus polymyxa SC2 chromosome, complete genomeorn/lys/arg decarboxylase major region2e-59230
NC_008261:3014373:3021783302178330231801398Clostridium perfringens ATCC 13124, complete genomeOrn/Lys/Arg decarboxylase5e-59229
NC_020291:1810527:1810527181052718119571431Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomearginine/lysine/ornithine decarboxylase1e-58227
NC_008262:2649289:2663598266359826649951398Clostridium perfringens SM101, complete genomeOrn/Lys/Arg decarboxylase2e-58226
NC_015275:1:1725917259186591401Clostridium lentocellum DSM 5427 chromosome, complete genomeArginine decarboxylase4e-58226
NC_006177:3457637:3477988347798834793971410Symbiobacterium thermophilum IAM 14863, complete genomearginine/lysine/ornithine decarboxylase5e-58225
NC_007775:1002934:1015046101504610165811536Synechococcus sp. JA-3-3Ab, complete genomeOrn/Lys/Arg decarboxylase6e-58225
NC_010674:3049500:3069278306927830706931416Clostridium botulinum B str. Eklund 17B, complete genomearginine/lysine decarboxylase1e-57224
NC_013406:2207520:2227312222731222287991488Paenibacillus sp. Y412MC10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region8e-58224
NC_008346:36176:5056250562520641503Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeOrn/Lys/Arg decarboxylase, major region9e-57221
NC_010723:2873886:2892952289295228943761425Clostridium botulinum E3 str. Alaska E43, complete genomearginine/lysine decarboxylase1e-56220
NC_014376:6296:2508925089265641476Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region3e-54213
NC_010424:14657:4182241822433091488Candidatus Desulforudis audaxviator MP104C, complete genomeOrn/Lys/Arg decarboxylase, major region6e-54211
NC_012778:2997:2242522425238281404Eubacterium eligens ATCC 27750, complete genomelysine decarboxylase1e-53210
NC_020134:1941523:1960996196099619624381443Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA6e-52205
NC_009089:4140764:4145070414507041464791410Clostridium difficile 630, complete genomeputative arginine decarboxylase3e-50199
NC_013316:4018451:4023484402348440248931410Clostridium difficile R20291, complete genomeputative arginine decarboxylase9e-50198
NC_014387:79808:98717987171002251509Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeOrn/Lys/Arg decarboxylase3e-49196
NC_016584:85543:1185231185231199741452Desulfosporosinus orientis DSM 765 chromosome, complete genomearginine/lysine/ornithine decarboxylase2e-47190
NC_019903:134169:1479881479881494391452Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,arginine/lysine/ornithine decarboxylase2e-41170
NC_017167:129988:1592031592031606031401Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Orn/Lys/Arg decarboxylase major region2e-39164
NC_009922:411434:4352154352154366691455Alkaliphilus oremlandii OhILAs, complete genomeOrn/Lys/Arg decarboxylase major region1e-38160
NC_015635:811500:8287988287988302191422Microlunatus phosphovorus NM-1, complete genomeputative arginine decarboxylase7e-38158
NC_002944:2373873:2373873237387323753301458Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-37157
NC_014376:386650:4070124070124084841473Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region1e-37157
NC_016048:1930089:1944576194457619459251350Oscillibacter valericigenes Sjm18-20, complete genomeputative pyridoxal phosphate-dependent transferase1e-34148
NC_005070:904751:9047519047519061571407Synechococcus sp. WH 8102, complete genomeOrn/Lys/Arg decarboxylase family 12e-31137
NC_007513:1311957:1340010134001013414251416Synechococcus sp. CC9902, complete genomeArginine decarboxylase1e-29131
NC_016884:157894:1751391751391765061368Sulfobacillus acidophilus DSM 10332 chromosome, complete genomearginine decarboxylase1e-26121
NC_009051:1242351:1251338125133812536412304Methanoculleus marisnigri JR1, complete genomeLysine decarboxylase5e-21102
NC_011149:2040396:2051599205159920529811383Salmonella enterica subsp. enterica serovar Agona str. SL483,lysine decarboxylase1e-1895.1
NC_011094:2061000:2073287207328720746691383Salmonella enterica subsp. enterica serovar Schwarzengrund strlysine decarboxylase4e-1892.8
NC_021177:7462000:746200474620047462990987Streptomyces fulvissimus DSM 40593, complete genomePutative aminoacid decarboxylase4e-1789.7
NC_016816:3952000:3962945396294539643301386Pantoea ananatis LMG 5342, complete genomeArginine/lysine/ornithine decarboxylase1e-1688.2
NC_012779:305969:3154533154533177232271Edwardsiella ictaluri 93-146, complete genomeOrn/Lys/Arg decarboxylase family, putative2e-1584.3
NC_016614:1543333:1557721155772115600152295Vibrio sp. EJY3 chromosome 2, complete sequencearginine decarboxylase4e-1583.2
NC_011742:4655373:4674284467428446766532370Escherichia coli S88 chromosome, complete genomeOrn/Lys/Arg decarboxylase6e-1582.4
NC_008563:4739333:4759622475962247619912370Escherichia coli APEC O1, complete genomehypothetical protein6e-1582.4
NC_004431:4270305:4285772428577242881412370Escherichia coli CFT073, complete genomehypothetical protein6e-1582.4
NC_016614:1543333:1560108156010815624022295Vibrio sp. EJY3 chromosome 2, complete sequenceresponse regulator receiver domain-containing protein1e-1481.3
NC_011004:2507566:2525654252565425280112358Rhodopseudomonas palustris TIE-1, complete genomeOrnithine decarboxylase7e-1479
NC_011989:2795811:2795811279581127981682358Agrobacterium vitis S4 chromosome 1, complete sequenceornithine decarboxylase9e-1478.6
NC_020453:3103549:3122535312253531248922358Agromonas oligotrophica S58 DNA, complete genomeornithine decarboxylase3e-1377
NC_014311:1106871:1110772111077211130512280Ralstonia solanacearum PSI07 chromosome, complete genomelysine decarboxylase (LDC)3e-1377
NC_012559:978419:99867899867810009332256Laribacter hongkongensis HLHK9, complete genomeAdi4e-1376.6
NC_008752:3595516:3600450360045036028312382Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLysine decarboxylase4e-1376.3
NC_010995:4338860:4357272435727243595242253Cellvibrio japonicus Ueda107, complete genomeprobable orn/arg/lys decarboxylase1e-1275.1
NC_010067:3247169:3265385326538532676552271Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1275.1
NC_004459:2025436:2052055205205520541632109Vibrio vulnificus CMCP6 chromosome I, complete sequenceLysine decarboxylase2e-1170.9
NC_014910:2779573:2779573277957327819332361Alicycliphilus denitrificans BC chromosome, complete genomelysine decarboxylase4e-1169.7
NC_011147:3075186:3077806307780630799322127Salmonella enterica subsp. enterica serovar Paratyphi A strornithine decarboxylase4e-1169.7
NC_006511:3079512:3082132308213230842582127Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCornithine decarboxylase isozyme4e-1169.7
NC_013361:5319497:5322767532276753249142148Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine decarboxylase 15e-1169.7
NC_010468:4252940:4275850427585042779972148Escherichia coli ATCC 8739, complete genomeLysine decarboxylase5e-1169.7
CP002797:4411763:4432684443268444348312148Escherichia coli NA114, complete genomeLysine decarboxylase5e-1169.7
NC_020064:3998715:3998715399871540008772163Serratia marcescens FGI94, complete genomearginine/lysine/ornithine decarboxylase6e-1169.3
NC_015061:3840463:3858477385847738606392163Rahnella sp. Y9602 chromosome, complete genomeOrnithine decarboxylase8e-1168.9
NC_017047:3907854:3925868392586839280302163Rahnella aquatilis HX2 chromosome, complete genomeornithine decarboxylase8e-1168.9
NC_011149:3187022:3189642318964231917772136Salmonella enterica subsp. enterica serovar Agona str. SL483,ornithine decarboxylase, constitutive7e-1168.9
NC_016845:4498097:4499394449939445015322139Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,ornithine decarboxylase9e-1168.6
NC_008253:334467:3463563463563484822127Escherichia coli 536, complete genomelysine decarboxylase1e-1068.6
NC_010634:3720214:3720214372021437223762163Yersinia pseudotuberculosis PB1/+, complete genomeOrn/Lys/Arg decarboxylase major region1e-1068.2
NC_008149:3556999:3556999355699935593262328Yersinia pestis Nepal516, complete genomeornithine decarboxylase2e-1067.8
NC_003143:1059580:1061095106109510632572163Yersinia pestis CO92, complete genomeornithine decarboxylase2e-1067.8
NC_004088:3689000:3689173368917336913352163Yersinia pestis KIM, complete genomeornithine decarboxylase isozyme2e-1067.8
NC_010067:4418000:4439355443935544414902136Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1067.8
NC_006155:3805640:3807164380716438093262163Yersinia pseudotuberculosis IP 32953, complete genomeOrnithine decarboxylase2e-1067.8
NC_020211:4484817:4487375448737544895432169Serratia marcescens WW4, complete genomeornithine decarboxylase2e-1067
NC_016818:3851542:3870201387020138723632163Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completearginine/lysine/ornithine decarboxylase3e-1067
NC_008253:3122148:3124737312473731268722136Escherichia coli 536, complete genomeornithine decarboxylase, constitutive3e-1067
NC_013364:3701895:3701895370189537040302136Escherichia coli O111:H- str. 11128, complete genomeornithine decarboxylase SpeC, constitutive3e-1067
NC_008786:3845988:3869870386987038721882319Verminephrobacter eiseniae EF01-2, complete genomeLysine decarboxylase4e-1066.6
NC_013508:275081:2890652890652900841020Edwardsiella tarda EIB202, complete genomeornithine decarboxylase isozyme5e-1066.2
NC_015566:4547702:4549336454933645514982163Serratia sp. AS12 chromosome, complete genomeOrnithine decarboxylase6e-1065.9
NC_009832:4482500:4483726448372644858882163Serratia proteamaculans 568, complete genomeOrnithine decarboxylase6e-1065.9
NC_013716:5201097:5273026527302652751612136Citrobacter rodentium ICC168, complete genomeornithine decarboxylase, constitutive8e-1065.5
NC_015424:4251369:4260525426052542627622238Aeromonas veronii B565 chromosome, complete genomeOrnithine decarboxylase, inducible8e-1065.5
NC_008825:2063990:2064818206481820670792262Methylibium petroleiphilum PM1, complete genomeLysine decarboxylase1e-0965.1
NC_004741:3041294:3041294304129430434892196Shigella flexneri 2a str. 2457T, complete genomeornithine decarboxylase isozyme1e-0964.7
NC_004337:3049118:3049118304911830513132196Shigella flexneri 2a str. 301, complete genomeornithine decarboxylase isozyme1e-0964.7
NC_017328:3088907:3088907308890730911022196Shigella flexneri 2002017 chromosome, complete genomeOrnithine decarboxylase isozyme1e-0964.7
NC_014500:1066911:1089233108923310913862154Dickeya dadantii 3937 chromosome, complete genomeornithine decarboxylase, constitutive1e-0964.7
NC_014966:1668822:1680989168098916823861398Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysine decarboxylase1e-0964.7
NC_013592:956829:9792839792839814362154Dickeya dadantii Ech586, complete genomeOrnithine decarboxylase2e-0964.3
NC_021066:4906239:4923478492347849256342157Raoultella ornithinolytica B6, complete genomeornithine decarboxylase3e-0963.5
NC_003198:3126548:3129168312916831312922125Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0963.2
NC_012880:3529017:3529017352901735311702154Dickeya dadantii Ech703, complete genomeOrnithine decarboxylase5e-0962.8
NC_004547:1062410:1076168107616810783212154Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeornithine decarboxylase, constitutive5e-0962.8
NC_020063:2785652:2793233279323327953772145Enterobacteriaceae bacterium strain FGI 57, complete genomearginine/lysine/ornithine decarboxylase5e-0962.8
NC_009792:4017510:4020136402013640222712136Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-0962.8
NC_013282:3719500:3719533371953337216712139Cronobacter turicensis, complete genomeOrnithine decarboxylase, constitutive8e-0962
NC_008529:1514000:1519643151964315217482106Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeArginine/lysine/ornithine decarboxylase8e-0962
NC_020260:263528:2840052840052861432139Cronobacter sakazakii Sp291, complete genomeornithine decarboxylase1e-0862
NC_008054:1502210:1508502150850215106072106Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeOrnithine decarboxylase1e-0861.6
NC_016631:2112175:2164634216463421670782445Granulicella mallensis MP5ACTX8 chromosome, complete genomelysine decarboxylase2e-0861.2
NC_013421:3752619:3752619375261937547722154Pectobacterium wasabiae WPP163, complete genomeOrnithine decarboxylase3e-0860.1
NC_015733:2194676:2204114220411422061622049Pseudomonas putida S16 chromosome, complete genomeornithine decarboxylase, constitutive2e-0757.4
NC_005362:1954443:1972219197221919743182100Lactobacillus johnsonii NCC 533, complete genomeornithine decarboxylase1e-0655.1