Pre_GI: BLASTP Hits

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Query: NC_003210:2721559:2740052 Listeria monocytogenes EGD-e, complete genome

Start: 2740052, End: 2740333, Length: 282

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003212:2814737:283100028310002831281282Listeria innocua Clip11262, complete genomehypothetical protein2e-47187
NC_008555:2628858:264509526450952645376282Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, galactitol-specific, IIB component2e-47187
NC_009617:234782:252522252522252800279Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphotransferase system, lactose/cellobiose-specific IIB subunit2e-30130
NC_017179:2513804:252709025270902527365276Clostridium difficile BI1, complete genomePTS system galactitol-specific transporter subunit IIB3e-30130
NC_013315:2505792:251907825190782519353276Clostridium difficile CD196 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB3e-30130
NC_013316:2585666:259963425996342599909276Clostridium difficile R20291, complete genomePTS system, galactitol-specific IIb component3e-30130
NC_014650:2417509:242851324285132428797285Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific subunit IIB1e-2098.6
NC_002570:207555:208899208899209183285Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, B component5e-1889.7
NC_013517:3948500:395185739518573952156300Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit6e-1579.7
NC_014624:1675500:176003717600371760312276Eubacterium limosum KIST612 chromosome, complete genomePTS system protein1e-1168.6
NC_011080:3941909:395424839542483954535288Salmonella enterica subsp. enterica serovar Newport str. SL254,putative IIB component of PTS system5e-1063.2
NC_010102:3919999:393175839317583932045288Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1063.2
NC_011149:3895921:390817639081763908463288Salmonella enterica subsp. enterica serovar Agona str. SL483,putative IIB component of PTS system5e-1063.2
NC_006905:3913988:392333139233313923618288Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein5e-1063.2
NC_003198:3855157:386484538648453865132288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIB component5e-1063.2
NC_011083:3985618:399787339978733998160288Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative IIB component of PTS system5e-1063.2
NC_003197:3971905:398366439836643983951288Salmonella typhimurium LT2, complete genomeputative periplasmic protein5e-1063.2
NC_004631:3841975:385033538503353850622288Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIB component of PTS system5e-1063.2
NC_006511:3759550:377179637717963772083288Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIB component5e-1063.2
NC_011094:3853036:386537638653763865663288Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system transporter subunit IIB5e-1063.2
NC_017047:3793000:380869238086923808976285Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB5e-1063.2
NC_015061:3725921:374404637440463744330285Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase5e-1063.2
NC_016863:3933848:394496339449633945250288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-1063.2
NC_016860:3995445:400656040065604006847288Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system IIB protein5e-1063.2
NC_016857:3993864:400497840049784005265288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system IIB component5e-1063.2
NC_016856:3985597:399735639973563997643288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-1063.2
NC_016810:3993863:400497740049774005264288Salmonella enterica subsp. enterica serovar Typhimurium strputative IIB component of PTS system5e-1063.2
NC_011147:3755725:376747537674753767762288Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIB5e-1063.2
NC_014363:114239:122074122074122370297Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit7e-1062.8
NC_015389:616430:624853624853625134282Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIB component, Gat family6e-1062.8
NC_012967:2105251:212764221276422127926285Escherichia coli B str. REL606 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB1e-0962
NC_008253:2198583:221485922148592215143285Escherichia coli 536, complete genomePTS system, galactitol-specific IIB component1e-0962
NC_013008:2824511:284359828435982843882285Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB2e-0961.2
NC_004431:2444972:246432424643242464608285Escherichia coli CFT073, complete genomePTS system, galactitol-specific IIB component2e-0961.2
NC_016818:3736213:375149537514953751779285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIB2e-0961.2
NC_014363:427393:444980444980445261282Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-0857.8
NC_014039:15236:250002500025302303Propionibacterium acnes SK137 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit4e-0857
NC_010473:4630361:463008646300864630364279Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme IIB component of PTS5e-0856.6
NC_000913:4528278:452827845282784528556279Escherichia coli K12, complete genomepredicted enzyme IIB component of PTS5e-0856.6
AC_000091:4534935:453493545349354535213279Escherichia coli W3110 DNA, complete genomepredicted enzyme IIB component of PTS5e-0856.6
NC_011742:4873351:487307648730764873354279Escherichia coli S88 chromosome, complete genomeenzyme IIB component of PTS; KpLE2 phage-like element5e-0856.6
NC_012759:4467288:446701344670134467291279Escherichia coli BW2952 chromosome, complete genomeputative enzyme IIB component of PTS5e-0856.6
NC_012947:3883484:390343739034373903715279Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeprotein-N(pi)-phosphohistidine--sugar phosphotransferase5e-0856.6
NC_012967:4510393:451039345103934510671279Escherichia coli B str. REL606 chromosome, complete genomeputative PTS system transporter subunit IIB5e-0856.6
NC_006085:15246:250112501125313303Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIB component8e-0855.8
NC_016511:15100:248652486525167303Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_016512:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_016516:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_014363:427393:435955435955436245291Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-0754.7
NC_009617:648000:652146652146652448303Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB3e-0753.9
NC_021182:3771523:378593337859333786214282Clostridium pasteurianum BC1, complete genomephosphotransferase system, galactitol-specific IIB component2e-0651.2