Pre_GI: BLASTP Hits

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Query: NC_003210:1904152:1918681 Listeria monocytogenes EGD-e, complete genome

Start: 1918681, End: 1919505, Length: 825

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013768:1983711:200386720038672004691825Listeria monocytogenes 08-5923, complete genomehypothetical protein3e-160563
NC_002973:1877905:189805718980571898881825Listeria monocytogenes str. 4b F2365, complete genomeSTAS domain protein4e-155547
NC_011660:724711:724711724711725535825Listeria monocytogenes HCC23 chromosome, complete genomestas domain protein5e-142503
NC_003212:1958500:197308519730851973909825Listeria innocua Clip11262, complete genomehypothetical protein3e-139494
NC_008555:1874878:189264018926401893461822Listeria welshimeri serovar 6b str. SLCC5334, complete genomeSTAS domain protein2e-106385
NC_013891:1861294:187687318768731877688816Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeSTAS domain protein3e-103375
NC_011420:365505:365505365505366332828Rhodospirillum centenum SW, complete genomesigma-B modulator protein3e-1168.9
NC_015634:2991669:301204930120493012873825Bacillus coagulans 2-6 chromosome, complete genomeanti-sigma-factor antagonist1e-1067.4
NC_010162:2406976:2419163241916324205211359Sorangium cellulosum 'So ce 56', complete genomepositive regulator of sigma-B4e-1065.5
NC_008044:136844:153682153682154578897Silicibacter sp. TM1040, complete genomeanti-sigma-factor antagonist2e-0963.5
NC_017191:641923:662327662327663193867Bacillus amyloliquefaciens XH7 chromosome, complete genomeRsbR protein3e-0962.8
NC_017188:635901:656305656305657171867Bacillus amyloliquefaciens TA208 chromosome, complete genomeSulphate transporter/antisigma-factor3e-0962.8
NC_014551:691594:712981712981713847867Bacillus amyloliquefaciens DSM 7, complete genomeSulphate transporter/antisigma-factor3e-0962.8
NC_010162:7824878:7843690784369078447571068Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-0962.4
NC_020272:3245834:324583432458343246700867Bacillus amyloliquefaciens IT-45, complete genomepositive regulator of sigma-B activity5e-0962
NC_010162:11908749:1191809611918096119230604965Sorangium cellulosum 'So ce 56', complete genomeprotein kinase4e-0962
UCMB5137:303641:326008326008326898891Bacillus atrophaeus UCMB-5137YetI8e-0961.2
NC_019842:680000:707185707185708051867Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-0960.8
NC_009725:692237:717460717460718344885Bacillus amyloliquefaciens FZB42, complete genomeYetI9e-0960.8
NC_014924:2517068:252303525230352523886852Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeanti-sigma-factor antagonist2e-0860.1
NC_010162:9502480:9518094951809495231905097Sorangium cellulosum 'So ce 56', complete genomeprotein kinase3e-0859.3
NC_019673:6394319:645032664503266451171846Saccharothrix espanaensis DSM 44229 complete genomeAnti-sigma-factor antagonist3e-0859.3
NC_019896:3491000:352063835206383521462825Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeModulator protein RsbR5e-0858.5
NC_015957:690817:706890706890707747858Streptomyces violaceusniger Tu 4113 chromosome, complete genomeanti-sigma-factor antagonist7e-0858.2
NC_018704:347948:348751348751349620870Amphibacillus xylanus NBRC 15112, complete genomemodulator protein RsbR8e-0857.8
NC_010505:5525461:554987755498775550752876Methylobacterium radiotolerans JCM 2831, complete genomeanti-sigma-factor antagonist3e-0755.8
NC_016940:3696570:369803236980323698667636Saprospira grandis str. Lewin chromosome, complete genomeanti-anti-sigma regulatory factor3e-0755.8
NC_016023:1083826:1104502110450211055211020Bacillus coagulans 36D1 chromosome, complete genomeanti-sigma-factor antagonist4e-0755.5
NC_014657:473479:485782485782486474693Caldicellulosiruptor owensensis OL chromosome, complete genomeanti-sigma-factor antagonist4e-0755.5
NC_004193:375416:652243652243653112870Oceanobacillus iheyensis HTE831, complete genomepositive regulator of sigma-B activity8e-0754.7