Pre_GI: BLASTP Hits

Some Help

Query: NC_003210:1904152:1905952 Listeria monocytogenes EGD-e, complete genome

Start: 1905952, End: 1906551, Length: 600

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013768:1983711:199113419911341991733600Listeria monocytogenes 08-5923, complete genomeshort chain dehydrogenase2e-110398
NC_011660:724711:737672737672738271600Listeria monocytogenes HCC23 chromosome, complete genomeshort chain dehydrogenase2e-110397
NC_002973:1877905:188532818853281885927600Listeria monocytogenes str. 4b F2365, complete genomeshort chain dehydrogenase4e-109393
NC_003212:1958500:196035819603581960957600Listeria innocua Clip11262, complete genomeshort chain dehydrogenase4e-108390
NC_008555:1874878:187989618798961880495600Listeria welshimeri serovar 6b str. SLCC5334, complete genomehypothetical protein3e-107387
NC_013891:1861294:186412618641261864725600Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomehypothetical protein9e-104375
NC_012968:1945614:194561419456141946213600Methylotenera mobilis JLW8, complete genomeshort-chain dehydrogenase/reductase SDR9e-50196
NC_009648:3720000:373747037374703738072603Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeshort chain dehydrogenase4e-48191
NC_012108:481657:492021492021492629609Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-45181
NC_010515:1900967:190791219079121908520609Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR2e-44178
NC_008061:2773670:278061427806142781222609Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR3e-43174
NC_008543:2474002:248578524857852486393609Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR3e-43174
NC_015424:3277292:328197632819763282584609Aeromonas veronii B565 chromosome, complete genomeShort-chain dehydrogenase/reductase SDR1e-40166
NC_014623:1829000:184290218429021843504603Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeaklaviketone reductase2e-39162
NC_016625:171341:180316180316180921606Burkholderia sp. YI23 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase2e-38158
NC_016901:2070121:208414520841452084750606Shewanella baltica OS678 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR1e-37155
NC_009997:2069894:208355820835582084163606Shewanella baltica OS195, complete genomeshort-chain dehydrogenase/reductase SDR1e-37155
NC_004347:791897:803222803222803839618Shewanella oneidensis MR-1, complete genomeshort chain dehydrogenase1e-36152
NC_021064:1705961:171931317193131719915603Propionibacterium avidum 44067, complete genomeshort chain dehydrogenase9e-36149
NC_020126:7015976:701861170186117019327717Myxococcus stipitatus DSM 14675, complete genomeshort chain dehydrogenase1e-0653.5