Query: NC_003198:1378457 Salmonella enterica subsp. enterica serovar Typhi str. CT18,
Start: 1378457, End: 1399126, Length: 20670
Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004631:1587000 | 1587000 | 1607278 | 20279 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 0 | 17830 | BLASTN svg | BLASTP svg |
NC_011080:1709612 | 1709612 | 1736142 | 26531 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 0 | 12360 | BLASTN svg | BLASTP svg |
NC_011149:1429523* | 1429523 | 1498087 | 68565 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 0 | 12320 | BLASTN svg | BLASTP svg |
NC_010102:1388344 | 1388344 | 1415723 | 27380 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 0 | 12310 | BLASTN svg | BLASTP svg |
NC_006905:1726416 | 1726416 | 1752945 | 26530 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 0 | 12270 | BLASTN svg | BLASTP svg |
NC_003197:1713259 | 1713259 | 1736599 | 23341 | Salmonella typhimurium LT2, complete genome | 0 | 12210 | BLASTN svg | BLASTP svg |
NC_011083:1761352 | 1761352 | 1787892 | 26541 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 0 | 12140 | BLASTN svg | BLASTP svg |
NC_010067:1300606* | 1300606 | 1321804 | 21199 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 0 | 9305 | BLASTN svg | BLASTP svg |
NC_013961:1891000 | 1891000 | 1913099 | 22100 | Erwinia amylovora, complete genome | 1e-125 | 458 | BLASTN svg | BLASTP svg |
NC_012880:3645304 | 3645304 | 3666812 | 21509 | Dickeya dadantii Ech703, complete genome | 6e-78 | 299 | BLASTN svg | BLASTP svg |
NC_013508:1862896 | 1862896 | 1886070 | 23175 | Edwardsiella tarda EIB202, complete genome | 2e-77 | 297 | BLASTN svg | BLASTP svg |
NC_009053:393700* | 393700 | 419642 | 25943 | Actinobacillus pleuropneumoniae L20, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_007492:1193626 | 1193626 | 1216997 | 23372 | Pseudomonas fluorescens PfO-1, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007712:3629358* | 3629358 | 3655468 | 26111 | Sodalis glossinidius str. 'morsitans', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010939:405477* | 405477 | 447424 | 41948 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013194:761166 | 761166 | 784099 | 22934 | Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014752:2087998* | 2087998 | 2115351 | 27354 | Neisseria lactamica ST-640, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008767:2010140 | 2010140 | 2029193 | 19054 | Neisseria meningitidis FAM18, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020181:1057476 | 1057476 | 1077175 | 19700 | Enterobacter aerogenes EA1509E, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015663:4347187 | 4347187 | 4370739 | 23553 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |