Pre_GI: BLASTP Hits

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Query: NC_003198:4676536:4712736 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4712736, End: 4716035, Length: 3300

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4649432:4672283467228346755823300Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein02273
NC_004631:4687270:4695660469566046989593300Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein02273
NC_011147:4460726:4483896448389644871953300Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein02259
NC_006511:4465495:4488666448866644919653300Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein02259
NC_013421:1819036:1825353182535318286463294Pectobacterium wasabiae WPP163, complete genomehypothetical protein01489
NC_020260:3355814:3364989336498933667341746Cronobacter sakazakii Sp291, complete genomehypothetical protein0817
AC_000091:4569379:4577094457709445786111518Escherichia coli W3110 DNA, complete genomehypothetical protein1e-180634
NC_018679:1738126:1765863176586317692613399Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completehypothetical protein1e-148528
NC_008702:2520500:2527848252784825314263579Azoarcus sp. BH72, complete genomeHypothetical protein6e-61236
NC_010162:11387949:1138794911387949113914073459Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-33145
NC_008463:282565:3097493097493117281980Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-29131
NC_010498:4899167:4912969491296949163283360Escherichia coli SMS-3-5, complete genomehypothetical protein7e-20100
NC_013941:5192500:5202149520214952055083360Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-1996.7
NC_013008:5382917:5393599539359953969523354Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1896.3
NC_002695:5352554:5363890536389053672433354Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1896.3
NC_002655:5382557:5393893539389353972463354Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-1896.3
NC_010468:4252940:4262336426233642656953360Escherichia coli ATCC 8739, complete genomehypothetical protein1e-1895.9
NC_012587:2298324:2298324229832423015753252Rhizobium sp. NGR234, complete genomehypothetical protein4e-1481.3
NC_008577:2402165:2437310243731024408523543Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-1275.5