Pre_GI: BLASTP Hits

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Query: NC_003198:4676536:4702716 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4702716, End: 4702925, Length: 210

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4649432:466226346622634662472210Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-26115
NC_016831:4517850:453308645330864533295210Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-25113
NC_011205:4718239:473327647332764733485210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-25113
NC_006511:4465495:447839244783924478601210Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-24111
NC_011080:4543000:456287245628724563084213Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1167.8