Pre_GI: BLASTP Hits

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Query: NC_003198:4676536:4696958 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4696958, End: 4697451, Length: 494

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011274:4538722:454806945480694548566498Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein1e-34145
NC_011205:4718239:472754847275484728084537Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial protein1e-34145
NC_011294:4560902:457021145702114570747537Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein1e-34145
NC_011147:4460726:446793444679344468431498Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial structural protein5e-34143
NC_006511:4465495:447270444727044473201498Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfimbrial structural protein5e-34143
NC_011205:4718239:472786447278644727998135Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1789
NC_016832:4649432:465681446568144656933120Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1581.3
NC_016831:4517850:452768945276894527808120Salmonella enterica subsp. enterica serovar Gallinarum/pullorumfimbrial protein4e-1580.5