Pre_GI: BLASTP Hits

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Query: NC_003198:4676536:4689566 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4689566, End: 4690426, Length: 861

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4661000:467245546724554673315861Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative phage capsid protein5e-166583
NC_014121:677799:690064690064690807744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative phage capsid protein2e-87322
NC_013508:3188978:324857332485733249376804Edwardsiella tarda EIB202, complete genomeputative phage capsid protein2e-67256
NC_009778:567000:597311597311598021711Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-47187
NC_020211:996497:100840610084061009188783Serratia marcescens WW4, complete genomeNAD-dependent aldehyde dehydrogenase2e-27123
NC_012917:3684840:369080836908083691569762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein6e-27121
NC_012917:833721:839217839217839978762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein9e-24110
NC_016818:1291665:130313713031371303886750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1996.7
NC_015061:1251905:126414312641431264892750Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-1893.6
NC_011740:448000:453384453384454184801Escherichia fergusonii ATCC 35469, complete genomeGlycoprotein 3 (Capsid size determination protein)2e-1893.2
NC_013361:4959323:496073749607374961471735Escherichia coli O26:H11 str. 11368 chromosome, complete genomecapsid size determining protein6e-1788.2
NC_007613:4217557:422250342225034223237735Shigella boydii Sb227, complete genomehypothetical protein8e-1787.8
NC_010468:49074:504805048051214735Escherichia coli ATCC 8739, complete genomehypothetical protein1e-1687
NC_010498:4072681:408652440865244087258735Escherichia coli SMS-3-5, complete genomeglycoprotein 3, capsid size determination protein Sid2e-1686.3
NC_010468:1130000:115162311516231152357735Escherichia coli ATCC 8739, complete genomehypothetical protein1e-1584
NC_016810:2871689:289526428952642896067804Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage capsid protein6e-1271.6
NC_021066:5342127:535991653599165360653738Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1169.7
NC_016845:575123:588482588482589219738Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-1066.2
NC_010102:2862178:286300328630032863740738Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1065.5
NC_011080:2870428:288343428834342884129696Salmonella enterica subsp. enterica serovar Newport str. SL254,glycoprotein 35e-0962
NC_016857:2871689:289526428952642895959696Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glycoprotein 36e-0961.6
NC_011147:4460726:446072644607264461463738Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-0961.6
NC_009436:3367194:337950033795003380231732Enterobacter sp. 638, complete genomehypothetical protein7e-0961.2
NC_006511:4465495:446549544654954466229735Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-0755.5
NC_015224:4426167:443395544339554434116162Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,NAD-dependent aldehyde Dehydrogenase3e-0652.8