Pre_GI: BLASTP Hits

Some Help

Query: NC_003198:4676536:4678442 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4678442, End: 4679542, Length: 1101

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4661000:4661331466133146624311101Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative inner membrane protein2e-168591
NC_016832:4649432:4649432464943246505111080Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide export system permease protein lptF3e-164578
NC_010498:4821519:4841167484116748422671101Escherichia coli SMS-3-5, complete genomeputative permease9e-160563
NC_010473:4564590:4586049458604945871491101Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein9e-160563
AC_000091:4472000:4490898449089844919981101Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein9e-160563
NC_007613:4217557:4233001423300142341011101Shigella boydii Sb227, complete genomehypothetical protein9e-160563
CU928160:4570498:4570498457049845715981101Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein9e-160563
NC_000913:4462782:4484241448424144853411101Escherichia coli K12, complete genomeconserved inner membrane protein9e-160563
NC_011741:4570498:4570498457049845715981101Escherichia coli IAI1 chromosome, complete genomehypothetical protein9e-160563
NC_011742:4795733:4815631481563148167311101Escherichia coli S88 chromosome, complete genomehypothetical protein9e-160563
NC_012967:4449576:4469445446944544705451101Escherichia coli B str. REL606 chromosome, complete genomeinner membrane protein9e-160563
NC_020063:4127161:4147300414730041484001101Enterobacteriaceae bacterium strain FGI 57, complete genomeputative permease2e-151535
NC_008258:4345400:4368861436886143698981038Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-151535
NC_013421:478586:4803794803794814911113Pectobacterium wasabiae WPP163, complete genomepermease YjgP/YjgQ family protein5e-130464
NC_004547:442927:4635314635314646461116Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative permease3e-126451
NC_017047:4298207:4311013431101343121071095Rahnella aquatilis HX2 chromosome, complete genomelipopolysaccharide ABC transporter permease LptF6e-124444
NC_015061:4203767:4217072421707242181661095Rahnella sp. Y9602 chromosome, complete genomepermease YjgP/YjgQ family protein6e-124444
NC_009832:622969:6247616247616258551095Serratia proteamaculans 568, complete genomepermease YjgP/YjgQ family protein2e-122439
NC_015567:547500:5493665493665504601095Serratia sp. AS9 chromosome, complete genomepermease YjgP/YjgQ family protein3e-122438
NC_015566:547387:5491805491805502741095Serratia sp. AS12 chromosome, complete genomepermease YjgP/YjgQ family protein3e-122438
NC_020211:554736:5601005601005611941095Serratia marcescens WW4, complete genomelipopolysaccharide export ABC permease of the LptBFGC export complex1e-121436
NC_007712:3629358:3649193364919336502931101Sodalis glossinidius str. 'morsitans', complete genomeputative transport protein7e-119427
NC_009381:3680638:3703829370382937049231095Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-118426
NC_014500:443874:4491004491004502181119Dickeya dadantii 3937 chromosome, complete genomehypothetical protein3e-118425
NC_013971:3296272:3331148333114833322481101Erwinia amylovora ATCC 49946 chromosome, complete genomepermease4e-118424
NC_013592:446092:4478834478834490011119Dickeya dadantii Ech586, complete genomepermease YjgP/YjgQ family protein7e-117420
NC_012880:4117376:4127645412764541287451101Dickeya dadantii Ech703, complete genomepermease YjgP/YjgQ family protein1e-116419
NC_012912:4194821:4206289420628942074011113Dickeya zeae Ech1591, complete genomepermease YjgP/YjgQ family protein8e-116417
NC_008800:575141:5769325769325780261095Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein8e-116417
NC_020418:116500:1562401562401573431104Morganella morganii subsp. morganii KT, complete genomePutative permease8e-108390
NC_016632:1695500:1704997170499717060911095Serratia symbiotica str. 'Cinara cedri' chromosome, completelipopolysaccharide export system permease protein6e-94344
NC_012913:280506:3025033025033036061104Aggregatibacter aphrophilus NJ8700, complete genome5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase5e-86318
NC_008309:555680:5596395596395607421104Haemophilus somnus 129PT, complete genomeconserved permease1e-72273
NC_009053:1257302:1274992127499212760231032Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein4e-68258
NC_010278:1235934:1237047123704712380511005Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,permease2e-66253
NC_017270:2500815:2515848251584825169481101Vibrio cholerae LMA3984-4 chromosome chromosome I, completepermease3e-63242
NC_007963:3225306:3249254324925432504141161Chromohalobacter salexigens DSM 3043, complete genomepermease YjgP/YjgQ2e-27123
NC_008463:1223012:1239195123919512403131119Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative permease2e-26120
NC_002516:4285477:4285477428547742865951119Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-26120
NC_011770:1226923:1243383124338312445011119Pseudomonas aeruginosa LESB58, complete genomeputative permease2e-26120
NC_018080:1100047:1117956111795611190741119Pseudomonas aeruginosa DK2 chromosome, complete genomepermease2e-26120
NC_020829:4246847:4262040426204042631641125Pseudomonas denitrificans ATCC 13867, complete genomepermease8e-26118
NC_013861:469500:4724954724954735741080Legionella longbeachae NSW150, complete genomePredicted membrane protein7e-23108
NC_002977:2254440:2259421225942122604401020Methylococcus capsulatus str. Bath, complete genomehypothetical protein6e-1995.5
NC_015136:813701:8263838263838274801098Burkholderia sp. CCGE1001 chromosome 1, complete sequencepermease YjgP/YjgQ family protein2e-1893.2
NC_010067:3538169:354071735407173540896180Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1067.8
NC_010002:3887926:3887926388792638890531128Delftia acidovorans SPH-1, complete genomepermease YjgP/YjgQ family protein5e-0962.4
NC_008825:2063990:2079391207939120804821092Methylibium petroleiphilum PM1, complete genomeputative transmembrane protein5e-0962.4
NC_011979:1683964:1682798168279816839671170Geobacter sp. FRC-32, complete genomepermease YjgP/YjgQ family protein7e-0962
NC_014306:4106569:4123570412357041246401071Erwinia billingiae Eb661, complete genomePutative permease3e-0756.6