Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4504708 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4504708, End: 4505217, Length: 510

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2676972:268846726884672688976510Salmonella enterica subsp. enterica serovar Paratyphi A strphage regulatory protein5e-97352
NC_006511:2677964:269293126929312693440510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage regulatory protein5e-97352
NC_016860:2896254:289884428988442899353510Salmonella enterica subsp. enterica serovar Typhimurium strphage regulatory protein3e-95347
NC_011149:2802199:281827228182722818781510Salmonella enterica subsp. enterica serovar Agona str. SL483,phage regulatory protein3e-95347
NC_003197:2870268:287527828752782875787510Salmonella typhimurium LT2, complete genomehypothetical protein3e-95347
NC_020260:312805:319980319980320489510Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-95346
NC_010694:614985:630293630293630802510Erwinia tasmaniensis, complete genomePhage regulatory protein2e-93341
NC_017046:2869873:288469528846952885204510Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage regulatory protein2e-93341
NC_016857:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage regulatory protein2e-93341
NC_016810:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage regulatory protein2e-93341
NC_011601:846358:857051857051857560510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein2e-90330
NC_011742:2823000:282843128284312828940510Escherichia coli S88 chromosome, complete genomeregulatory protein cII6e-88322
NC_009436:1466580:147853314785331479042510Enterobacter sp. 638, complete genomephage regulatory CII family protein3e-79293
NC_009436:3807420:381195838119583812467510Enterobacter sp. 638, complete genomephage regulatory CII family protein2e-72270
NC_011205:2938356:295352829535282953974447Salmonella enterica subsp. enterica serovar Dublin str. CT_020218536e-72269
NC_009648:3803622:383244238324423832951510Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein for establishment of lysogeny2e-71267
NC_016845:4046142:405227840522784052787510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp315e-65246
NC_020181:5182568:519431351943135194822510Enterobacter aerogenes EA1509E, complete genomeRegulatory protein CII8e-65245
NC_013282:3389619:340414834041483404657510Cronobacter turicensis, complete genomeRegulatory protein CII7e-63239
NC_014837:2458780:247114224711422471651510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein6e-62236
NC_013956:3525711:354228535422853542794510Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein5e-61233
NC_014837:3766426:378110237811023781611510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein7e-56216
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein7e-56216
NC_014306:1244721:125003212500321250541510Erwinia billingiae Eb661, complete genomePhage regulatory CII family protein3e-53207
NC_014500:894136:920427920427920936510Dickeya dadantii 3937 chromosome, complete genomeRegulatory protein CII8e-53206
NC_013592:804288:822485822485822994510Dickeya dadantii Ech586, complete genomeregulatory CII family protein3e-52204
NC_012917:3565268:357732935773293577838510Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeregulatory CII family protein5e-49193
NC_014562:2871765:287632228763222876831510Pantoea vagans C9-1 chromosome, complete genomeRegulatory protein CII1e-47188
NC_006155:2116834:212213021221302122639510Yersinia pseudotuberculosis IP 32953, complete genomeregulatory protein CII bacteriophage 1864e-45180
NC_015061:596247:612574612574613080507Rahnella sp. Y9602 chromosome, complete genomeregulatory protein CII bacteriophage 1867e-44176
NC_020211:4598217:461323446132344613743510Serratia marcescens WW4, complete genomephage regulatory CII family protein8e-44176
NC_015061:2770856:277872327787232779232510Rahnella sp. Y9602 chromosome, complete genomeregulatory CII family protein2e-42171
NC_006511:2718401:272430327243032724833531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene2e-38158
NC_011147:2713937:271983927198392720369531Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein2e-38158
NC_012125:894955:921486921486921989504Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-37155
NC_011080:2870428:287551428755142876017504Salmonella enterica subsp. enterica serovar Newport str. SL254,regulatory protein CII bacteriophage 1862e-37154
NC_015424:2726223:275689127568912757400510Aeromonas veronii B565 chromosome, complete genomephage protein2e-21101
NC_009348:4135002:415310241531024153635534Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein1e-1789
NC_009348:1663870:166795316679531668474522Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein6e-1786.7
NC_009784:253852:267391267391267930540Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein2e-1375.1
NC_016628:373815:386881386881387420540Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage regulatory protein (CII)2e-1065.1
NC_016745:1892500:189806918980691898605537Oceanimonas sp. GK1 chromosome, complete genomephage protein1e-0858.9