Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4499824 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4499824, End: 4502238, Length: 2415

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2676972:2683595268359526859972403Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein01618
NC_014562:2871765:2885067288506728863921326Pantoea vagans C9-1 chromosome, complete genomeProbable replication endonuclease from prophage- like region0722
NC_013850:3303500:3315653331565333182532601Klebsiella variicola At-22 chromosome, complete genomereplication protein A0859
NC_011742:2823000:2824202282420228262892088Escherichia coli S88 chromosome, complete genomebacteriophage replication gene A protein (endonuclease)01229
NC_010694:614985:6321366321366345502415Erwinia tasmaniensis, complete genomePutative replication protein for prophage01327
NC_009436:1466580:1481090148109014835012412Enterobacter sp. 638, complete genomebacteriophage replication gene A01367
NC_011601:846358:8594528594528618662415Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein01369
NC_007613:761234:7664947664947689082415Shigella boydii Sb227, complete genomepossible endonuclease01377
NC_017046:2869873:2880139288013928823762238Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein01436
NC_016810:2871689:2881397288139728836402244Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein01439
NC_006511:2677964:2688059268805926904612403Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein01618
NC_020260:312805:3232483232483256562409Cronobacter sakazakii Sp291, complete genomebacteriophage replication protein A01553
NC_016860:2896254:2893834289383428962632430Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein01499
NC_003197:2870268:2870268287026828726972430Salmonella typhimurium LT2, complete genomehypothetical protein01499
NC_011149:2802199:2813448281344828156852238Salmonella enterica subsp. enterica serovar Agona str. SL483,01456
NC_011205:2938356:2948481294848129508772397Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage replication gene A01452
NC_016857:2871689:2881397288139728836402244Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative replication endonuclease from prophage-like region01439
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein1e-175617
NC_012779:2127542:2157084215708421596902607Edwardsiella ictaluri 93-146, complete genomereplication protein A8e-140498
NC_006155:2208686:2208686220868622112412556Yersinia pseudotuberculosis IP 32953, complete genomeputative phage replication protein4e-127456
NC_010634:2124185:2124185212418521267402556Yersinia pseudotuberculosis PB1/+, complete genomereplication gene A9e-126451
NC_014837:3766426:3777765377776537797742010Pantoea sp. At-9b chromosome, complete genomereplication protein A7e-89328
NC_011080:2870428:2871002287100228730232022Salmonella enterica subsp. enterica serovar Newport str. SL254,replication gene A protein8e-88325
NC_012125:894955:9241889241889262092022Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-87323
NC_011147:2713937:2715623271562327171551533Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein2e-86320
NC_006511:2718401:2720087272008727216191533Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene2e-86320
NC_015061:2770856:2775254277525427774102157Rahnella sp. Y9602 chromosome, complete genomereplication protein A2e-83310
NC_013592:804288:8242108242108262552046Dickeya dadantii Ech586, complete genomereplication protein A1e-80301
NC_009648:3803622:3829192382919238310121821Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein3e-80300
NC_016845:4046142:4055149405514940572122064Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp361e-79298
NC_009436:3807420:3807420380742038096422223Enterobacter sp. 638, complete genomebacteriophage replication gene A1e-79298
NC_014500:894136:9221489221489241902043Dickeya dadantii 3937 chromosome, complete genomeReplication gene A protein4e-79296
NC_020181:5182568:5190399519039951925192121Enterobacter aerogenes EA1509E, complete genomePhage replication protein5e-79296
NC_013282:3389619:3399976339997634019341959Cronobacter turicensis, complete genomeReplication gene A protein2e-77290
NC_014306:1244721:1253164125316412554252262Erwinia billingiae Eb661, complete genomeBacteriophage replication gene A3e-76287
NC_013956:3525711:3537067353706735393612295Pantoea ananatis LMG 20103 chromosome, complete genomeA8e-76285
NC_008800:1870596:1882132188213218844202289Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phage replication protein4e-75283
NC_020211:4598217:4609161460916146113772217Serratia marcescens WW4, complete genomephage replication protein2e-74280
NC_012917:3565268:3580433358043335827362304Pectobacterium carotovorum subsp. carotovorum PC1, complete genomereplication protein A3e-74280
NC_013892:992811:9928119928119950332223Xenorhabdus bovienii SS-2004 chromosome, complete genomereplication gene A protein (GpA)2e-72274
NC_020418:3022891:3039850303985030421622313Morganella morganii subsp. morganii KT, complete genomehypothetical protein6e-71269
NC_017047:4037674:4048153404815340503212169Rahnella aquatilis HX2 chromosome, complete genomereplication protein A1e-69265
NC_012967:2105251:2116486211648621187772292Escherichia coli B str. REL606 chromosome, complete genomeReplication gene A protein2e-69264
NC_016514:2334870:2342361234236123446912331Enterobacter cloacae EcWSU1 chromosome, complete genomereplication endonuclease from prophage-like region3e-69264
NC_015061:596247:6145476145476167902244Rahnella sp. Y9602 chromosome, complete genomereplication protein A4e-69263
NC_009801:995396:1004301100430110065772277Escherichia coli E24377A, complete genomereplication gene A protein9e-69262
NC_011353:2825500:2833462283346228357442283Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage replication gene A protein9e-68258
NC_013008:2824511:2832442283244228347242283Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage replication initiation protein9e-68258
NC_016818:1605918:1613573161357316158702298Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeBacteriophage replication gene A protein (GPA)2e-66254
NC_015061:1598920:1606607160660716088892283Rahnella sp. Y9602 chromosome, complete genomereplication protein A4e-66253
NC_017047:1551836:1559523155952315618322310Rahnella aquatilis HX2 chromosome, complete genomereplication protein A9e-66252
NC_014306:103545:1118481118481140972250Erwinia billingiae Eb661, complete genomePhage replication protein2e-62241
NC_015731:2811579:2815161281516128168731713Nitrosomonas sp. Is79A3 chromosome, complete genomereplication gene A2e-61237
NC_009348:1663870:1663870166387016661432274Aeromonas salmonicida subsp. salmonicida A449, complete genomephage replication initiation protein A2e-59231
NC_009348:4135002:4148999414899941512782280Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein2e-59231
NC_015424:2726223:2759789275978927620292241Aeromonas veronii B565 chromosome, complete genomephage protein5e-59229
NC_016628:373815:3889143889143915442631Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage protein5e-58226
NC_006155:2116834:2119005211900521212872283Yersinia pseudotuberculosis IP 32953, complete genomeputative phage P2 replication protein9e-58225
NC_012962:4942000:496033549603354961183849Photorhabdus asymbiotica, complete genomeputative phage replication protein2e-54214
NC_013456:1843000:1846904184690418484481545Vibrio sp. Ex25 chromosome 1, complete genomeputative replication protein2e-53211
NC_016745:1892500:1894077189407718963592283Oceanimonas sp. GK1 chromosome, complete genomebacteriophage replication protein A2e-53211
NC_008750:3314309:3332204333220433344412238Shewanella sp. W3-18-1, complete genomebacteriophage replication gene A2e-52207
NC_005139:1784000:1819943181994318214871545Vibrio vulnificus YJ016 chromosome I, complete sequenceA protein1e-50202
NC_004459:2443000:2503609250360925051441536Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative replication protein9e-50199
NC_012559:854507:8705088705088722741767Laribacter hongkongensis HLHK9, complete genomePutative phage replication protein1e-49198
NC_018678:87064:9049690496921391644Alteromonas macleodii str. 'English Channel 673' chromosome,replication protein A4e-49196
NC_014323:2680085:2693590269359026953681779Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage replication protein6e-49196
NC_015731:2460248:2478827247882724805211695Nitrosomonas sp. Is79A3 chromosome, complete genomereplication gene A2e-48194
NC_009438:3019552:3027173302717330290951923Shewanella putrefaciens CN-32 chromosome, complete genomebacteriophage replication gene A2e-47191
NC_014323:961825:9718439718439738942052Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage replication A protein6e-47189
NC_009784:253852:2686252686252705111887Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein6e-45183
NC_012917:2362725:2380769238076923825771809Pectobacterium carotovorum subsp. carotovorum PC1, complete genomereplication protein A2e-44181
NC_020211:3151458:3162955316295531641181164Serratia marcescens WW4, complete genomephage replication protein6e-44179
NC_012724:1892000:1894988189498818968951908Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein7e-44179
NC_008228:776000:7855287855287882092682Pseudoalteromonas atlantica T6c, complete genomebacteriophage replication gene A2e-40167
NC_011742:2823000:282384928238492824205357Escherichia coli S88 chromosome, complete genomehypothetical protein1e-36155
NC_012912:1053618:1064104106410410657561653Dickeya zeae Ech1591, complete genomereplication gene A protein4e-32140
NC_015563:4959843:4974617497461749766592043Delftia sp. Cs1-4 chromosome, complete genomereplication protein A4e-30134
NC_016835:128757:138654138654139565912Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,3e-22107
NC_015633:1702000:1714303171430317161021800Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-1379.3
NC_012962:4942000:495968149596814960262582Photorhabdus asymbiotica, complete genomeputative phage replication protein7e-0860.1
NC_006155:2893802:290064429006442900910267Yersinia pseudotuberculosis IP 32953, complete genomeputative phage replication protein gene fragment4e-0654.3
NC_010634:2810815:281765728176572817923267Yersinia pseudotuberculosis PB1/+, complete genome4e-0654.3