Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4498909 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4498909, End: 4499127, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2676972:268268026826802682898219Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-35148
NC_006511:2677964:268714426871442687362219Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-35148
NC_011601:846358:863253863253863525273Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-1786.7
NC_010694:614985:635228635228635380153Erwinia tasmaniensis, complete genomehypothetical protein8e-1682.4
NC_014837:3766426:377732337773233777424102Pantoea sp. At-9b chromosome, complete genome1e-0858.5